RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 BAG3O95817 575 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 PLCG2P16885 1265 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 PTPRAP18433 802 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 SP3Q02447 781 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 CLASRPQ8N2M8 674 aaKnown RBP17.16■□□□□ 0.34
SF3B2-215ENST00000534307 CD99L2Q8TCZ2 262 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 ZFYVE28Q9HCC9 887 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-215ENST00000534307 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 APBB1O00213 710 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 TLR2O60603 784 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
SF3B2-215ENST00000534307 ANKRD23Q86SG2 305 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 NOL10Q9BSC4 688 aaKnown RBP17.15■□□□□ 0.34
SF3B2-215ENST00000534307 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 ZHX2Q9Y6X8 837 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 FLT1P17948 1338 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 ADGRA2Q96PE1 1338 aa17.15■□□□□ 0.34
SF3B2-215ENST00000534307 IDH1O75874 414 aaKnown RBP17.14■□□□□ 0.33
SF3B2-215ENST00000534307 CYP7A1P22680 504 aa17.14■□□□□ 0.33
SF3B2-215ENST00000534307 METTL16Q86W50 562 aaKnown RBP17.14■□□□□ 0.33
SF3B2-215ENST00000534307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.14■□□□□ 0.33
SF3B2-215ENST00000534307 PICK1Q9NRD5 415 aa17.14■□□□□ 0.33
SF3B2-215ENST00000534307 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.14■□□□□ 0.33
SF3B2-215ENST00000534307 ATAD5Q96QE3 1844 aa17.14■□□□□ 0.33
SF3B2-215ENST00000534307 A0A0G2JLL6 359 aaPredicted RBP17.13■□□□□ 0.33
SF3B2-215ENST00000534307 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
SF3B2-215ENST00000534307 RRP1BQ14684 758 aaKnown RBP17.13■□□□□ 0.33
SF3B2-215ENST00000534307 GPAT2Q6NUI2 795 aa17.13■□□□□ 0.33
SF3B2-215ENST00000534307 PRRT2Q7Z6L0 340 aaPredicted RBP17.13■□□□□ 0.33
SF3B2-215ENST00000534307 MAGEB6Q8N7X4 407 aa17.13■□□□□ 0.33
SF3B2-215ENST00000534307 TGFBRAP1Q8WUH2 860 aa17.13■□□□□ 0.33
SF3B2-215ENST00000534307 DHX36Q9H2U1 1008 aaKnown RBP17.13■□□□□ 0.33
SF3B2-215ENST00000534307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.13■□□□□ 0.33
SF3B2-215ENST00000534307 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
SF3B2-215ENST00000534307 HERC5Q9UII4 1024 aaKnown RBP17.13■□□□□ 0.33
SF3B2-215ENST00000534307 PDHXO00330 501 aa17.12■□□□□ 0.33
SF3B2-215ENST00000534307 IFIT2P09913 472 aaKnown RBP17.12■□□□□ 0.33
SF3B2-215ENST00000534307 MAP3K12Q12852 859 aa17.12■□□□□ 0.33
SF3B2-215ENST00000534307 C17orf99Q6UX52 265 aa17.12■□□□□ 0.33
SF3B2-215ENST00000534307 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
SF3B2-215ENST00000534307 DNAJC18Q9H819 358 aa17.12■□□□□ 0.33
SF3B2-215ENST00000534307 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
SF3B2-215ENST00000534307 CCDC84Q86UT8 332 aaPredicted RBP17.11■□□□□ 0.33
SF3B2-215ENST00000534307 CERS3Q8IU89 383 aa17.11■□□□□ 0.33
SF3B2-215ENST00000534307 MIGA1Q8NAN2 632 aa17.11■□□□□ 0.33
SF3B2-215ENST00000534307 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
SF3B2-215ENST00000534307 EFCC1Q9HA90 598 aa17.11■□□□□ 0.33
SF3B2-215ENST00000534307 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
SF3B2-215ENST00000534307 MYH1P12882 1939 aa17.1■□□□□ 0.33
SF3B2-215ENST00000534307 CAP2P40123 477 aa17.1■□□□□ 0.33
SF3B2-215ENST00000534307 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
SF3B2-215ENST00000534307 FASTKD5Q7L8L6 764 aaKnown RBP17.1■□□□□ 0.33
SF3B2-215ENST00000534307 RIOK1Q9BRS2 568 aaKnown RBP17.1■□□□□ 0.33
SF3B2-215ENST00000534307 PALD1Q9ULE6 856 aa17.1■□□□□ 0.33
SF3B2-215ENST00000534307 TCRBV5S4A2TA0A5A2 114 aa17.09■□□□□ 0.33
SF3B2-215ENST00000534307 PDE6AP16499 860 aa17.09■□□□□ 0.33
SF3B2-215ENST00000534307 ATP5JP18859 108 aa17.09■□□□□ 0.33
SF3B2-215ENST00000534307 LACTBP83111 547 aaPredicted RBP17.09■□□□□ 0.33
SF3B2-215ENST00000534307 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
SF3B2-215ENST00000534307 ARHGAP39Q9C0H5 1083 aa17.09■□□□□ 0.33
SF3B2-215ENST00000534307 SLC45A1Q9Y2W3 748 aa17.09■□□□□ 0.33
SF3B2-215ENST00000534307 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
SF3B2-215ENST00000534307 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
SF3B2-215ENST00000534307 GOLIM4O00461 696 aa17.08■□□□□ 0.32
SF3B2-215ENST00000534307 JAG1P78504 1218 aa17.08■□□□□ 0.32
SF3B2-215ENST00000534307 FOXP4Q8IVH2 680 aaPredicted RBP17.08■□□□□ 0.32
SF3B2-215ENST00000534307 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.32
SF3B2-215ENST00000534307 DCTPP1Q9H773 170 aa17.08■□□□□ 0.32
SF3B2-215ENST00000534307 CPA4Q9UI42 421 aa17.08■□□□□ 0.32
SF3B2-215ENST00000534307 H0YGN5 161 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 CYP2C8P10632 490 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 BCRP11274 1271 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 CTGFP29279 349 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 RRP1P56182 461 aaKnown RBP17.07■□□□□ 0.32
SF3B2-215ENST00000534307 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 ZNF280CQ8ND82 737 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 PARK7Q99497 189 aaKnown RBP17.07■□□□□ 0.32
SF3B2-215ENST00000534307 DNAJC2Q99543 621 aaKnown RBP17.07■□□□□ 0.32
SF3B2-215ENST00000534307 HAUS7Q99871 368 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 TBC1D2Q9BYX2 928 aa17.07■□□□□ 0.32
SF3B2-215ENST00000534307 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
SF3B2-215ENST00000534307 SMARCA5O60264 1052 aaPredicted RBP17.06■□□□□ 0.32
SF3B2-215ENST00000534307 SHROOM1Q2M3G4 852 aaPredicted RBP17.06■□□□□ 0.32
SF3B2-215ENST00000534307 GADL1Q6ZQY3 521 aa17.06■□□□□ 0.32
SF3B2-215ENST00000534307 TMEM106CQ9BVX2 250 aa17.06■□□□□ 0.32
SF3B2-215ENST00000534307 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
SF3B2-215ENST00000534307 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
SF3B2-215ENST00000534307 PCDHB15Q9Y5E8 787 aa17.06■□□□□ 0.32
SF3B2-215ENST00000534307 NAV1Q8NEY1 1877 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 ZNF532Q9HCE3 1301 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 USP17L5A8MUK1 530 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 HLA-DOAP06340 250 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 SPP2Q13103 211 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 ARHGEF6Q15052 776 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 TREML2Q5T2D2 321 aa17.05■□□□□ 0.32
SF3B2-215ENST00000534307 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
SF3B2-215ENST00000534307 WDR18Q9BV38 432 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms