RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 AATFQ9NY61 560 aaKnown RBP eCLIP24.21■■□□□ 1.47
NDUFS3-212ENST00000534208 HERC5Q9UII4 1024 aaKnown RBP24.21■■□□□ 1.47
NDUFS3-212ENST00000534208 TRIM75PA6NK02 468 aa24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 FAM196BA6NMK8 535 aa24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 FMNL1O95466 1100 aaPredicted RBP24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 OSBPP22059 807 aa24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 SH3TC2Q8TF17 1288 aa24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 EAF2Q96CJ1 260 aaPredicted RBP24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 TBC1D2Q9BYX2 928 aa24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.2■■□□□ 1.46
NDUFS3-212ENST00000534208 ZAP70P43403 619 aa24.19■■□□□ 1.46
NDUFS3-212ENST00000534208 ADGRA1Q86SQ6 560 aa24.19■■□□□ 1.46
NDUFS3-212ENST00000534208 PANK1Q8TE04 598 aa24.19■■□□□ 1.46
NDUFS3-212ENST00000534208 TLR7Q9NYK1 1049 aaKnown RBP24.19■■□□□ 1.46
NDUFS3-212ENST00000534208 PI4KBQ9UBF8 816 aa24.19■■□□□ 1.46
NDUFS3-212ENST00000534208 AGTPBP1Q9UPW5 1226 aa24.19■■□□□ 1.46
NDUFS3-212ENST00000534208 MYO5AQ9Y4I1 1855 aaKnown RBP24.19■■□□□ 1.46
NDUFS3-212ENST00000534208 CDK5RAP2Q96SN8 1893 aa24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 CAP2P40123 477 aa24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 FCGRTP55899 365 aa24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 SLC4A8Q2Y0W8 1093 aa24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 CCDC84Q86UT8 332 aaPredicted RBP24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 CCDC8Q9H0W5 538 aaPredicted RBP24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 PIH1D3Q9NQM4 214 aaKnown RBP24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 FOCADQ5VW36 1801 aa24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 ATAD5Q96QE3 1844 aa24.18■■□□□ 1.46
NDUFS3-212ENST00000534208 MGAMO43451 1857 aa24.17■■□□□ 1.46
NDUFS3-212ENST00000534208 SIPA1L1O43166 1804 aa24.17■■□□□ 1.46
NDUFS3-212ENST00000534208 MYPNQ86TC9 1320 aa24.17■■□□□ 1.46
NDUFS3-212ENST00000534208 ECM2O94769 699 aaPredicted RBP24.17■■□□□ 1.46
NDUFS3-212ENST00000534208 MS4A1P11836 297 aa24.17■■□□□ 1.46
NDUFS3-212ENST00000534208 ERC1Q8IUD2 1116 aa24.17■■□□□ 1.46
NDUFS3-212ENST00000534208 PROCA1Q8NCQ7 364 aaPredicted RBP24.17■■□□□ 1.46
NDUFS3-212ENST00000534208 FLT1P17948 1338 aa24.16■■□□□ 1.46
NDUFS3-212ENST00000534208 RRP1BQ14684 758 aaKnown RBP24.16■■□□□ 1.46
NDUFS3-212ENST00000534208 METTL16Q86W50 562 aaKnown RBP24.16■■□□□ 1.46
NDUFS3-212ENST00000534208 ZNF280CQ8ND82 737 aa24.16■■□□□ 1.46
NDUFS3-212ENST00000534208 RAET1EQ8TD07 263 aa24.16■■□□□ 1.46
NDUFS3-212ENST00000534208 TGFBRAP1Q8WUH2 860 aa24.16■■□□□ 1.46
NDUFS3-212ENST00000534208 LOC285556D6RIA3 1793 aa24.16■■□□□ 1.46
NDUFS3-212ENST00000534208 GRK4P32298 578 aa24.15■■□□□ 1.46
NDUFS3-212ENST00000534208 SPP2Q13103 211 aa24.15■■□□□ 1.46
NDUFS3-212ENST00000534208 SMCR8Q8TEV9 937 aaPredicted RBP24.15■■□□□ 1.46
NDUFS3-212ENST00000534208 USP17L5A8MUK1 530 aa24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 MYCP01106 439 aaPredicted RBP24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 PRKCZQ05513 592 aa24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 TREML2Q5T2D2 321 aa24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 TMED8Q6PL24 325 aaPredicted RBP24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 FOXP4Q8IVH2 680 aaPredicted RBP24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 MAPKAPK5Q8IW41 473 aa24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 PNMA3Q9UL41 463 aa24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 EXOC6BQ9Y2D4 811 aa24.14■■□□□ 1.45
NDUFS3-212ENST00000534208 HSP90AB4PQ58FF6 505 aa24.13■■□□□ 1.45
NDUFS3-212ENST00000534208 CERS3Q8IU89 383 aa24.13■■□□□ 1.45
NDUFS3-212ENST00000534208 CYP7A1P22680 504 aa24.12■■□□□ 1.45
NDUFS3-212ENST00000534208 SH3D19Q5HYK7 790 aa24.12■■□□□ 1.45
NDUFS3-212ENST00000534208 AACSQ86V21 672 aa24.12■■□□□ 1.45
NDUFS3-212ENST00000534208 WDR18Q9BV38 432 aa24.12■■□□□ 1.45
NDUFS3-212ENST00000534208 DNAJC18Q9H819 358 aa24.12■■□□□ 1.45
NDUFS3-212ENST00000534208 AS3MTQ9HBK9 375 aa24.12■■□□□ 1.45
NDUFS3-212ENST00000534208 IDH1O75874 414 aaKnown RBP24.11■■□□□ 1.45
NDUFS3-212ENST00000534208 ASNSP08243 561 aa24.11■■□□□ 1.45
NDUFS3-212ENST00000534208 HMGCS2P54868 508 aa24.11■■□□□ 1.45
NDUFS3-212ENST00000534208 PABPC4Q13310 644 aaKnown RBP eCLIP24.11■■□□□ 1.455e-6■□□□□ 10.8
NDUFS3-212ENST00000534208 MTFR1Q15390 333 aa24.11■■□□□ 1.45
NDUFS3-212ENST00000534208 GINM1Q9NU53 330 aa24.11■■□□□ 1.45
NDUFS3-212ENST00000534208 PALD1Q9ULE6 856 aa24.11■■□□□ 1.45
NDUFS3-212ENST00000534208 DYNLL1P63167 89 aaKnown RBP24.1■■□□□ 1.45
NDUFS3-212ENST00000534208 FAM110CQ1W6H9 321 aa24.1■■□□□ 1.45
NDUFS3-212ENST00000534208 RPAP2Q8IXW5 612 aaPredicted RBP24.1■■□□□ 1.45
NDUFS3-212ENST00000534208 SLAIN1Q8ND83 568 aa24.1■■□□□ 1.45
NDUFS3-212ENST00000534208 GCC1Q96CN9 775 aa24.1■■□□□ 1.45
NDUFS3-212ENST00000534208 GABRQQ9UN88 632 aa24.1■■□□□ 1.45
NDUFS3-212ENST00000534208 TNPO2O14787 897 aaKnown RBP24.09■■□□□ 1.45
NDUFS3-212ENST00000534208 GCLCP48506 637 aaPredicted RBP24.09■■□□□ 1.45
NDUFS3-212ENST00000534208 CRACR2BQ8N4Y2 399 aaPredicted RBP24.09■■□□□ 1.45
NDUFS3-212ENST00000534208 ANKRD13CQ8N6S4 541 aa24.09■■□□□ 1.45
NDUFS3-212ENST00000534208 MAGEB6Q8N7X4 407 aa24.09■■□□□ 1.45
NDUFS3-212ENST00000534208 RHPN1Q8TCX5 695 aa24.09■■□□□ 1.45
NDUFS3-212ENST00000534208 DDX19BQ9UMR2 479 aa24.09■■□□□ 1.45
NDUFS3-212ENST00000534208 HLA-DOAP06340 250 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 FLT3LGP49771 235 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 BACE1P56817 501 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 UBXN2AP68543 259 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 JAG1P78504 1218 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 MAP3K12Q12852 859 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 IRF5Q13568 498 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 NKX2-3Q8TAU0 364 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 TRIM34Q9BYJ4 488 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 ANTXR1Q9H6X2 564 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 ZBTB40Q9NUA8 1239 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 NDUFB9Q9Y6M9 179 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 CEP290O15078 2479 aa24.08■■□□□ 1.45
NDUFS3-212ENST00000534208 GJB1P08034 283 aa24.07■■□□□ 1.44
NDUFS3-212ENST00000534208 CCL5P13501 91 aa24.07■■□□□ 1.44
NDUFS3-212ENST00000534208 MIGA1Q8NAN2 632 aa24.07■■□□□ 1.44
NDUFS3-212ENST00000534208 PXYLP1Q8TE99 480 aa24.07■■□□□ 1.44
NDUFS3-212ENST00000534208 SHISA4Q96DD7 197 aa24.07■■□□□ 1.44
NDUFS3-212ENST00000534208 ASCC2Q9H1I8 757 aaPredicted RBP24.07■■□□□ 1.44
NDUFS3-212ENST00000534208 IL1RAPL2Q9NP60 686 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms