RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 GREM2Q9H772 168 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 EXOC6BQ9Y2D4 811 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 ANKRD31Q8N7Z5 1873 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 TNRC6CQ9HCJ0 1690 aaKnown RBP7.57□□□□□ -1.2
CMTM1-220ENST00000534143 TAF1P21675 1872 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 KLRG2A4D1S0 409 aaPredicted RBP7.56□□□□□ -1.2
CMTM1-220ENST00000534143 SASH1O94885 1247 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 MMP10P09238 476 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 ITGA6P23229 1130 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 YY1P25490 414 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 GTF2E1P29083 439 aaPredicted RBP7.56□□□□□ -1.2
CMTM1-220ENST00000534143 IFIT5Q13325 482 aaKnown RBP7.56□□□□□ -1.2
CMTM1-220ENST00000534143 CCDC57Q2TAC2 916 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 CCDC152Q4G0S7 254 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 HSP90AB4PQ58FF6 505 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 MSL1Q68DK7 614 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 ATG9AQ7Z3C6 839 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 PRICKLE2Q7Z3G6 844 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 CHD1LQ86WJ1 897 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 SKAP1Q86WV1 359 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 CNBD1Q8NA66 436 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 RHPN1Q8TCX5 695 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 ZNF594Q96JF6 807 aaPredicted RBP7.56□□□□□ -1.2
CMTM1-220ENST00000534143 ARHGEF10LQ9HCE6 1279 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
CMTM1-220ENST00000534143 RBM19Q9Y4C8 960 aaKnown RBP7.56□□□□□ -1.2
CMTM1-220ENST00000534143 COL4A1P02462 1669 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 ANKRD18BA2A2Z9 1011 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 EYA2O00167 538 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 SMARCA5O60264 1052 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-220ENST00000534143 CIAO1O76071 339 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 G3BP1Q13283 466 aaKnown RBP eCLIP7.55□□□□□ -1.2
CMTM1-220ENST00000534143 MAP7D1Q3KQU3 841 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 KIF1BPQ96EK5 621 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 PUS3Q9BZE2 481 aaKnown RBP7.55□□□□□ -1.2
CMTM1-220ENST00000534143 LRRCC1Q9C099 1032 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 ALG2Q9H553 416 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 SEC31BQ9NQW1 1179 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 RIPOR2Q9Y4F9 1068 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
CMTM1-220ENST00000534143 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-220ENST00000534143 SALL3Q9BXA9 1300 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 IL15P40933 162 aaPredicted RBP7.54□□□□□ -1.2
CMTM1-220ENST00000534143 ST5P78524 1137 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 CRY2Q49AN0 593 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 LRRC24Q50LG9 513 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 ERC1Q8IUD2 1116 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 C16orf71Q8IYS4 520 aaPredicted RBP7.54□□□□□ -1.2
CMTM1-220ENST00000534143 GPR161Q8N6U8 529 aaKnown RBP7.54□□□□□ -1.2
CMTM1-220ENST00000534143 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 ESYT1Q9BSJ8 1104 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 BRIP1Q9BX63 1249 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 FHDC1Q9C0D6 1143 aaPredicted RBP7.54□□□□□ -1.2
CMTM1-220ENST00000534143 MTFR1LQ9H019 292 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 SIL1Q9H173 461 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 SPEF2Q9C093 1822 aa7.54□□□□□ -1.2
CMTM1-220ENST00000534143 NPHP1O15259 732 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 IL2RAP01589 272 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 RHOQP17081 205 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-220ENST00000534143 HOXA10P31260 410 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-220ENST00000534143 OS9Q13438 667 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-220ENST00000534143 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 LDHAL6AQ6ZMR3 332 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 PLEKHM2Q8IWE5 1019 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 CELF1Q92879 486 aaKnown RBP7.53□□□□□ -1.2
CMTM1-220ENST00000534143 CNKSR1Q969H4 720 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 XAGE2Q96GT9 111 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 CDC5LQ99459 802 aaKnown RBP7.53□□□□□ -1.2
CMTM1-220ENST00000534143 IL1RAPL2Q9NP60 686 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 GPR108Q9NPR9 543 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
CMTM1-220ENST00000534143 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.2
CMTM1-220ENST00000534143 A0A1B0GUL6 1792 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 SPATA31C2B4DYI2 1134 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 PDE6BP35913 854 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 IGHMBP2P38935 993 aaKnown RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 RGS3P49796 1198 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 RPS8P62241 208 aaKnown RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 CENPCQ03188 943 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 TFCP2Q12800 502 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 POU4F2Q12837 409 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 TAF7LQ5H9L4 462 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 DDX46Q7L014 1031 aaKnown RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 ANKRD18AQ8IVF6 992 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 CLASRPQ8N2M8 674 aaKnown RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 VGLL2Q8N8G2 317 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 EAF2Q96CJ1 260 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 CRAMP1Q96RY5 1269 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 SYT17Q9BSW7 474 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 BSDC1Q9NW68 430 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 STAP2Q9UGK3 403 aa7.52□□□□□ -1.21
CMTM1-220ENST00000534143 COL11A2P13942 1736 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-220ENST00000534143 PIK3CDO00329 1044 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 SRGNP10124 158 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms