RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 GRIK5Q16478 980 aa11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 ZNF594Q96JF6 807 aaPredicted RBP11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 C11orf49Q9H6J7 331 aa11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 PTPRFP10586 1907 aa11.72□□□□□ -0.53
SOX9-AS1-213ENST00000533996 HMGCRP04035 888 aa11.71□□□□□ -0.53
SOX9-AS1-213ENST00000533996 SYN1P17600 705 aa11.71□□□□□ -0.53
SOX9-AS1-213ENST00000533996 OGDHLQ9ULD0 1010 aa11.71□□□□□ -0.53
SOX9-AS1-213ENST00000533996 AFG3L2Q9Y4W6 797 aa11.71□□□□□ -0.53
SOX9-AS1-213ENST00000533996 ZHX2Q9Y6X8 837 aa11.71□□□□□ -0.53
SOX9-AS1-213ENST00000533996 COL2A1P02458 1487 aaPredicted RBP11.7□□□□□ -0.54
SOX9-AS1-213ENST00000533996 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
SOX9-AS1-213ENST00000533996 FAM110CQ1W6H9 321 aa11.7□□□□□ -0.54
SOX9-AS1-213ENST00000533996 SMCR8Q8TEV9 937 aaPredicted RBP11.7□□□□□ -0.54
SOX9-AS1-213ENST00000533996 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
SOX9-AS1-213ENST00000533996 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
SOX9-AS1-213ENST00000533996 MYH13Q9UKX3 1938 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 DPYSL4O14531 572 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 EPHA10Q5JZY3 1008 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 TMEM92Q6UXU6 159 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 GADL1Q6ZQY3 521 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 SCYL3Q8IZE3 742 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 GUCD1Q96NT3 240 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PHIPQ8WWQ0 1821 aa11.69□□□□□ -0.54
SOX9-AS1-213ENST00000533996 KIF16BQ96L93 1317 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 DOCK2Q92608 1830 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 GRM8O00222 908 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PTPRAP18433 802 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 GCLCP48506 637 aaPredicted RBP11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 MAP3K10Q02779 954 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 WDR66Q8TBY9 1149 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 IQSEC3Q9UPP2 1182 aaPredicted RBP11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 AGTPBP1Q9UPW5 1226 aa11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 SPTBN5Q9NRC6 3674 aaKnown RBP11.68□□□□□ -0.54
SOX9-AS1-213ENST00000533996 VCANP13611 3396 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PDE8BO95263 885 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 TCP10Q12799 353 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 ZNF697Q5TEC3 545 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 CDC42EP5Q6NZY7 148 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 ANKRD13CQ8N6S4 541 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PUS3Q9BZE2 481 aaKnown RBP11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 C9orf78Q9NZ63 289 aaPredicted RBP11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 GJD2Q9UKL4 321 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 DOCK1Q14185 1865 aa11.67□□□□□ -0.54
SOX9-AS1-213ENST00000533996 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 COL6A1P12109 1028 aa11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PABPC4Q13310 644 aaKnown RBP eCLIP11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 MAP3K21Q5TCX8 1036 aa11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PROCA1Q8NCQ7 364 aaPredicted RBP11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 TSR2Q969E8 191 aaKnown RBP11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 ATRNL1Q5VV63 1379 aa11.66□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PLXNB2O15031 1838 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 PFASO15067 1338 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 ENTPD3O75355 529 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 ALDH1L1O75891 902 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 METTL24Q5JXM2 366 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 TBC1D2Q9BYX2 928 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 LRRFIP2Q9Y608 721 aaKnown RBP11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 EYSQ5T1H1 3165 aa11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 LAMA2P24043 3122 aaKnown RBP11.65□□□□□ -0.54
SOX9-AS1-213ENST00000533996 IL16Q14005 1332 aa11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 IFIT1P09914 478 aaKnown RBP11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 NFIAQ12857 509 aa11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 LBHD1Q9BQE6 289 aaPredicted RBP11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 DAGLAQ9Y4D2 1042 aa11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 LOC285556D6RIA3 1793 aa11.64□□□□□ -0.55
SOX9-AS1-213ENST00000533996 F6X3S4 739 aa11.63□□□□□ -0.55
SOX9-AS1-213ENST00000533996 VAMP4O75379 141 aa11.63□□□□□ -0.55
SOX9-AS1-213ENST00000533996 COL9A1P20849 921 aa11.63□□□□□ -0.55
SOX9-AS1-213ENST00000533996 TRIM32Q13049 653 aa11.63□□□□□ -0.55
SOX9-AS1-213ENST00000533996 MAFAQ8NHW3 353 aaPredicted RBP11.63□□□□□ -0.55
SOX9-AS1-213ENST00000533996 FAM161BQ96MY7 647 aa11.63□□□□□ -0.55
SOX9-AS1-213ENST00000533996 CDX2Q99626 313 aaPredicted RBP11.63□□□□□ -0.55
SOX9-AS1-213ENST00000533996 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
SOX9-AS1-213ENST00000533996 TBC1D12O60347 775 aa11.62□□□□□ -0.55
SOX9-AS1-213ENST00000533996 FGFR2P21802 821 aa11.62□□□□□ -0.55
SOX9-AS1-213ENST00000533996 PUM3Q15397 648 aaKnown RBP11.62□□□□□ -0.55
SOX9-AS1-213ENST00000533996 LRRC26Q2I0M4 334 aa11.62□□□□□ -0.55
SOX9-AS1-213ENST00000533996 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
SOX9-AS1-213ENST00000533996 ZFPM1Q8IX07 1006 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms