RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.37
RRP8-204ENST00000533907 GBP3Q9H0R5 595 aa17.33■□□□□ 0.37
RRP8-204ENST00000533907 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.37
RRP8-204ENST00000533907 ADGRG1Q9Y653 693 aa17.33■□□□□ 0.37
RRP8-204ENST00000533907 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.37
RRP8-204ENST00000533907 FOXN1O15353 648 aa17.33■□□□□ 0.36
RRP8-204ENST00000533907 TNNT3P45378 269 aaPredicted RBP17.33■□□□□ 0.36
RRP8-204ENST00000533907 PLCD1P51178 756 aa17.33■□□□□ 0.36
RRP8-204ENST00000533907 APOA5Q6Q788 366 aa17.33■□□□□ 0.36
RRP8-204ENST00000533907 VPS18Q9P253 973 aa17.33■□□□□ 0.36
RRP8-204ENST00000533907 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
RRP8-204ENST00000533907 CHD4Q14839 1912 aa17.33■□□□□ 0.36
RRP8-204ENST00000533907 SOWAHDA6NJG2 315 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 GPAA1O43292 621 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 TUBBP07437 444 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 ERCC5P28715 1186 aaPredicted RBP17.32■□□□□ 0.36
RRP8-204ENST00000533907 PDE4CQ08493 712 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 CT47A1Q5JQC4 288 aaPredicted RBP17.32■□□□□ 0.36
RRP8-204ENST00000533907 KANK3Q6NY19 840 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 C10orf67Q8IYJ2 551 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
RRP8-204ENST00000533907 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
RRP8-204ENST00000533907 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
RRP8-204ENST00000533907 HSPA2P54652 639 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 MTF1Q14872 753 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 TRMT44Q8IYL2 757 aaKnown RBP17.31■□□□□ 0.36
RRP8-204ENST00000533907 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
RRP8-204ENST00000533907 PUS7LQ9H0K6 701 aaKnown RBP17.31■□□□□ 0.36
RRP8-204ENST00000533907 LZTFL1Q9NQ48 299 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 RSPH14Q9UHP6 348 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 LCMT1Q9UIC8 334 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 MCM6Q14566 821 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 NOM1Q5C9Z4 860 aaKnown RBP17.31■□□□□ 0.36
RRP8-204ENST00000533907 NOSTRINQ8IVI9 506 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 STK11IPQ8N1F8 1099 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 GOLGA6L1Q8N7Z2 621 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 PHKBQ93100 1093 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 ZNF594Q96JF6 807 aaPredicted RBP17.31■□□□□ 0.36
RRP8-204ENST00000533907 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 NBPF3Q9H094 633 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 ZSWIM4Q9H7M6 989 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 PUF60Q9UHX1 559 aaKnown RBP17.31■□□□□ 0.36
RRP8-204ENST00000533907 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 L1RE1Q9UN81 338 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 UBN2Q6ZU65 1347 aa17.31■□□□□ 0.36
RRP8-204ENST00000533907 CTAGE9A4FU28 777 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 ZBTB43O43298 467 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 NTRK3Q16288 839 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 RASGRP2Q7LDG7 609 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 ZNF579Q8NAF0 562 aaKnown RBP17.3■□□□□ 0.36
RRP8-204ENST00000533907 FAM71BQ8TC56 605 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 WASF1Q92558 559 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 PNKPQ96T60 521 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.3■□□□□ 0.366e-6■■□□□ 14.1
RRP8-204ENST00000533907 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
RRP8-204ENST00000533907 TTF2Q9UNY4 1162 aaKnown RBP17.3■□□□□ 0.36
RRP8-204ENST00000533907 LRP6O75581 1613 aa17.3■□□□□ 0.36
RRP8-204ENST00000533907 GOLGA8AA7E2F4 631 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 TRIM66O15016 1216 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 PTPREP23469 700 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 WHAMMP3Q1A5X7 153 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 CYB5R4Q7L1T6 521 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 TBC1D10CQ8IV04 446 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
RRP8-204ENST00000533907 CCDC51Q96ER9 411 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 XAGE2Q96GT9 111 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
RRP8-204ENST00000533907 SAMSN1Q9NSI8 373 aaKnown RBP17.29■□□□□ 0.36
RRP8-204ENST00000533907 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 SERTAD1Q9UHV2 236 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 POLR2DO15514 142 aaKnown RBP17.29■□□□□ 0.36
RRP8-204ENST00000533907 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
RRP8-204ENST00000533907 MFAP3LO75121 409 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
RRP8-204ENST00000533907 KIF4BQ2VIQ3 1234 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 IGSF22Q8N9C0 903 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
RRP8-204ENST00000533907 NID2Q14112 1375 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 UBR2Q8IWV8 1755 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 AKAP11Q9UKA4 1901 aa17.29■□□□□ 0.36
RRP8-204ENST00000533907 FECHP22830 423 aa17.28■□□□□ 0.36
RRP8-204ENST00000533907 ADORA1P30542 326 aa17.28■□□□□ 0.36
RRP8-204ENST00000533907 PBX1P40424 430 aa17.28■□□□□ 0.36
RRP8-204ENST00000533907 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
RRP8-204ENST00000533907 SSRP1Q08945 709 aaKnown RBP17.28■□□□□ 0.36
RRP8-204ENST00000533907 SAFBQ15424 915 aaKnown RBP eCLIP17.28■□□□□ 0.36
RRP8-204ENST00000533907 ZNF827Q17R98 1081 aa17.28■□□□□ 0.36
RRP8-204ENST00000533907 HSP90B2PQ58FF3 399 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms