RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 ATP8B1O43520 1251 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 CD44P16070 742 aaKnown RBP5.1□□□□□ -1.59
CTSC-208ENST00000533897 HAND2P61296 217 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 DPYDQ12882 1025 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 KRT222Q8N1A0 295 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 PIGBQ92521 554 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 AK7Q96M32 723 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 MTRQ99707 1265 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 FANCLQ9NW38 375 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 DNAI1Q9UI46 699 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 PCDHA5Q9Y5H7 936 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 ZNF532Q9HCE3 1301 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 A0A0U1RQJ8 604 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 EFCAB8A8MWE9 144 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 M0R2N6 131 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 TULP1O00294 542 aaPredicted RBP5.1□□□□□ -1.59
CTSC-208ENST00000533897 PLCB2Q00722 1185 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 HSP90AB3PQ58FF7 597 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 SYT10Q6XYQ8 523 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 TOGARAM2Q6ZUX3 1019 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 TMC6Q7Z403 805 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 ADGRA1Q86SQ6 560 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 NOSTRINQ8IVI9 506 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 ATRIPQ8WXE1 791 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 ZBTB3Q9H5J0 574 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 TRMT1Q9NXH9 659 aaKnown RBP5.1□□□□□ -1.59
CTSC-208ENST00000533897 RAB21Q9UL25 225 aa5.1□□□□□ -1.59
CTSC-208ENST00000533897 SRPRBQ9Y5M8 271 aaKnown RBP5.1□□□□□ -1.59
CTSC-208ENST00000533897 ITIH6Q6UXX5 1313 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ADAMTS3O15072 1205 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 DHX16O60231 1041 aaKnown RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 STX10O60499 249 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 PHKA1P46020 1223 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 IL17AQ16552 155 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 CCDC102BQ68D86 513 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 FILIP1Q7Z7B0 1213 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 TRIML1Q8N9V2 468 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 PHF20Q9BVI0 1012 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 FUT8Q9BYC5 575 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 MRPL44Q9H9J2 332 aaKnown RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 PPP2R2CQ9Y2T4 447 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 SIPA1L1O43166 1804 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 PPP1R3GB7ZBB8 358 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 PATL2C9JE40 543 aaKnown RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 SYKP43405 635 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 CCDC158Q5M9N0 1113 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 PROSER2Q86WR7 435 aaPredicted RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 C4orf32Q8N8J7 132 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 PHKBQ93100 1093 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 NEUROD6Q96NK8 337 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 PANX2Q96RD6 677 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ALG1Q9BT22 464 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ANKZF1Q9H8Y5 726 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ERVV-1B6SEH8 477 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ZNF213O14771 459 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ARHGAP6O43182 974 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ITGA6P23229 1130 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 FOSBP53539 338 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 AMPD2Q01433 879 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 GOLGA8FQ08AF8 430 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 GOLGA8DPQ0D2H9 430 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 USP49Q70CQ1 688 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 CRACR2BQ8N4Y2 399 aaPredicted RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 MSANTD4Q8NCY6 345 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 HNRNPLLQ8WVV9 542 aaKnown RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 FAM89AQ96GI7 184 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 ADD3Q9UEY8 706 aaKnown RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.09□□□□□ -1.59
CTSC-208ENST00000533897 KCNH3Q9ULD8 1083 aa5.09□□□□□ -1.59
CTSC-208ENST00000533897 V9GYY5 206 aaPredicted RBP5.09□□□□□ -1.59
CTSC-208ENST00000533897 SMIM22K7EJ46 135 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 RNF225M0QZC1 329 aaPredicted RBP5.09□□□□□ -1.6
CTSC-208ENST00000533897 IL2RBP14784 551 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 LMOD1P29536 600 aaPredicted RBP5.09□□□□□ -1.6
CTSC-208ENST00000533897 MARCKSP29966 332 aaPredicted RBP5.09□□□□□ -1.6
CTSC-208ENST00000533897 ARHGAP25P42331 645 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 SLC20A2Q08357 652 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 RASGRF1Q13972 1273 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 STK38Q15208 465 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 LRRFIP1Q32MZ4 808 aaKnown RBP5.09□□□□□ -1.6
CTSC-208ENST00000533897 CC2D1AQ6P1N0 951 aaPredicted RBP5.09□□□□□ -1.6
CTSC-208ENST00000533897 IFNL3Q8IZI9 196 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 RIOK1Q9BRS2 568 aaKnown RBP5.09□□□□□ -1.6
CTSC-208ENST00000533897 AATFQ9NY61 560 aaKnown RBP eCLIP5.09□□□□□ -1.6
CTSC-208ENST00000533897 CEP126Q9P2H0 1117 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 ASAP1Q9ULH1 1129 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 TBC1D2BQ9UPU7 963 aa5.09□□□□□ -1.6
CTSC-208ENST00000533897 B4E1Z4 1266 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 SEMA3EO15041 775 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 ERCC5P28715 1186 aaPredicted RBP5.08□□□□□ -1.6
CTSC-208ENST00000533897 METAP2P50579 478 aaKnown RBP eCLIP5.08□□□□□ -1.6
CTSC-208ENST00000533897 TTF1Q15361 905 aaPredicted RBP5.08□□□□□ -1.6
CTSC-208ENST00000533897 TTC39AQ5SRH9 613 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 PDXDC2PQ6P474 469 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 RAD9BQ6WBX8 426 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 ZNF662Q6ZS27 426 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 RASGRP2Q7LDG7 609 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 DRC7Q8IY82 874 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 OXER1Q8TDS5 423 aa5.08□□□□□ -1.6
CTSC-208ENST00000533897 SYTL4Q96C24 671 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms