RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 DDX19BQ9UMR2 479 aa21.43■■□□□ 1.02
CAPN5-207ENST00000533889 COG6Q9Y2V7 657 aa21.43■■□□□ 1.02
CAPN5-207ENST00000533889 COL2A1P02458 1487 aaPredicted RBP21.43■■□□□ 1.02
CAPN5-207ENST00000533889 CENPFP49454 3210 aa21.43■■□□□ 1.02
CAPN5-207ENST00000533889 DOCK1Q14185 1865 aa21.43■■□□□ 1.02
CAPN5-207ENST00000533889 HOXD10P28358 340 aa21.42■■□□□ 1.02
CAPN5-207ENST00000533889 PRMT2P55345 433 aa21.42■■□□□ 1.02
CAPN5-207ENST00000533889 PDE4DIPQ5VU43 2346 aa21.42■■□□□ 1.02
CAPN5-207ENST00000533889 ADGRA2Q96PE1 1338 aa21.42■■□□□ 1.02
CAPN5-207ENST00000533889 IL1RAPL2Q9NP60 686 aa21.42■■□□□ 1.02
CAPN5-207ENST00000533889 HERC5Q9UII4 1024 aaKnown RBP21.42■■□□□ 1.02
CAPN5-207ENST00000533889 RCAN3Q9UKA8 241 aa21.42■■□□□ 1.02
CAPN5-207ENST00000533889 APBB1O00213 710 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 HMMRO75330 724 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 MYCP01106 439 aaPredicted RBP21.41■■□□□ 1.02
CAPN5-207ENST00000533889 CAP2P40123 477 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
CAPN5-207ENST00000533889 ZNF333Q96JL9 665 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 TRIM47Q96LD4 638 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 TRIM34Q9BYJ4 488 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 NDUFB9Q9Y6M9 179 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 ZSWIM8A7E2V4 1837 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 MAST2Q6P0Q8 1798 aa21.41■■□□□ 1.02
CAPN5-207ENST00000533889 CTGFP29279 349 aa21.4■■□□□ 1.02
CAPN5-207ENST00000533889 DYNLL1P63167 89 aaKnown RBP21.4■■□□□ 1.02
CAPN5-207ENST00000533889 SPP2Q13103 211 aa21.4■■□□□ 1.02
CAPN5-207ENST00000533889 RHPN1Q8TCX5 695 aa21.4■■□□□ 1.02
CAPN5-207ENST00000533889 SH3TC2Q8TF17 1288 aa21.4■■□□□ 1.02
CAPN5-207ENST00000533889 CHMP4BQ9H444 224 aaKnown RBP21.4■■□□□ 1.02
CAPN5-207ENST00000533889 SLC45A1Q9Y2W3 748 aa21.4■■□□□ 1.02
CAPN5-207ENST00000533889 MYO5AQ9Y4I1 1855 aaKnown RBP21.4■■□□□ 1.02
CAPN5-207ENST00000533889 FLT1P17948 1338 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 BCRP11274 1271 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 MAP3K12Q12852 859 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 SLC4A8Q2Y0W8 1093 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 FOXP4Q8IVH2 680 aaPredicted RBP21.39■■□□□ 1.01
CAPN5-207ENST00000533889 CRACR2BQ8N4Y2 399 aaPredicted RBP21.39■■□□□ 1.01
CAPN5-207ENST00000533889 MAGEB6Q8N7X4 407 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 ZNF280CQ8ND82 737 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 SMCR8Q8TEV9 937 aaPredicted RBP21.39■■□□□ 1.01
CAPN5-207ENST00000533889 ZBTB40Q9NUA8 1239 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 SRRDQ9UH36 339 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 PALD1Q9ULE6 856 aa21.39■■□□□ 1.01
CAPN5-207ENST00000533889 USP17L5A8MUK1 530 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 EN2P19622 333 aaPredicted RBP21.38■■□□□ 1.01
CAPN5-207ENST00000533889 OSBPP22059 807 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 RRP1BQ14684 758 aaKnown RBP21.38■■□□□ 1.01
CAPN5-207ENST00000533889 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
CAPN5-207ENST00000533889 MIGA1Q8NAN2 632 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 RAET1EQ8TD07 263 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 KIF1BPQ96EK5 621 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 ANTXR1Q9H6X2 564 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 SAP30BPQ9UHR5 308 aaKnown RBP21.38■■□□□ 1.01
CAPN5-207ENST00000533889 AGTPBP1Q9UPW5 1226 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 PHIPQ8WWQ0 1821 aa21.38■■□□□ 1.01
CAPN5-207ENST00000533889 FCGRTP55899 365 aa21.37■■□□□ 1.01
CAPN5-207ENST00000533889 AS3MTQ9HBK9 375 aa21.37■■□□□ 1.01
CAPN5-207ENST00000533889 KIAA0100Q14667 2235 aaKnown RBP21.36■■□□□ 1.01
CAPN5-207ENST00000533889 MYPNQ86TC9 1320 aa21.36■■□□□ 1.01
CAPN5-207ENST00000533889 HLA-DOAP06340 250 aa21.36■■□□□ 1.01
CAPN5-207ENST00000533889 IFIT2P09913 472 aaKnown RBP21.36■■□□□ 1.01
CAPN5-207ENST00000533889 USP5P45974 858 aa21.36■■□□□ 1.01
CAPN5-207ENST00000533889 TREML2Q5T2D2 321 aa21.36■■□□□ 1.01
CAPN5-207ENST00000533889 CERS3Q8IU89 383 aa21.36■■□□□ 1.01
CAPN5-207ENST00000533889 PROCA1Q8NCQ7 364 aaPredicted RBP21.36■■□□□ 1.01
CAPN5-207ENST00000533889 PNMA3Q9UL41 463 aa21.36■■□□□ 1.01
CAPN5-207ENST00000533889 PTPRFP10586 1907 aa21.35■■□□□ 1.01
CAPN5-207ENST00000533889 HMGCS2P54868 508 aa21.35■■□□□ 1.01
CAPN5-207ENST00000533889 PRPF38BQ5VTL8 546 aaKnown RBP21.35■■□□□ 1.01
CAPN5-207ENST00000533889 SIRT2Q8IXJ6 389 aa21.35■■□□□ 1.01
CAPN5-207ENST00000533889 ATAD5Q96QE3 1844 aa21.34■■□□□ 1.01
CAPN5-207ENST00000533889 RAB11FIP3O75154 756 aa21.34■■□□□ 1.01
CAPN5-207ENST00000533889 ASNSP08243 561 aa21.34■■□□□ 1.01
CAPN5-207ENST00000533889 PABPC4Q13310 644 aaKnown RBP eCLIP21.34■■□□□ 1.01
CAPN5-207ENST00000533889 TTF1Q15361 905 aaPredicted RBP21.34■■□□□ 1.01
CAPN5-207ENST00000533889 TMED8Q6PL24 325 aaPredicted RBP21.34■■□□□ 1.01
CAPN5-207ENST00000533889 BIN2Q9UBW5 565 aaPredicted RBP21.34■■□□□ 1.01
CAPN5-207ENST00000533889 CDK5RAP2Q96SN8 1893 aa21.34■■□□□ 1.01
CAPN5-207ENST00000533889 RBBP6Q7Z6E9 1792 aaKnown RBP21.33■■□□□ 1.01
CAPN5-207ENST00000533889 GRK4P32298 578 aa21.33■■□□□ 1.01
CAPN5-207ENST00000533889 PRKCZQ05513 592 aa21.33■■□□□ 1.01
CAPN5-207ENST00000533889 METTL16Q86W50 562 aaKnown RBP21.33■■□□□ 1.01
CAPN5-207ENST00000533889 ANKRD13CQ8N6S4 541 aa21.33■■□□□ 1.01
CAPN5-207ENST00000533889 DNAJC18Q9H819 358 aa21.33■■□□□ 1.01
CAPN5-207ENST00000533889 GDF11O95390 407 aa21.32■■□□□ 1
CAPN5-207ENST00000533889 DNAJC2Q99543 621 aaKnown RBP21.32■■□□□ 1
CAPN5-207ENST00000533889 WDR18Q9BV38 432 aa21.32■■□□□ 1
CAPN5-207ENST00000533889 FOCADQ5VW36 1801 aa21.32■■□□□ 1
CAPN5-207ENST00000533889 GOLIM4O00461 696 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 TNPO2O14787 897 aaKnown RBP21.31■■□□□ 1
CAPN5-207ENST00000533889 JAG1P78504 1218 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 PDE3AQ14432 1141 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 SH3D19Q5HYK7 790 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 SLC9C2Q5TAH2 1124 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 C20orf194Q5TEA3 1177 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 GINM1Q9NU53 330 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 TMOD4Q9NZQ9 345 aa21.31■■□□□ 1
CAPN5-207ENST00000533889 GABRQQ9UN88 632 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms