RNA–Protein interactions for RNA: ENST00000533845.1

PDE4DIP-233, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-233	ENST00000533845	BCL11A	Q9H165	835 aa		13.84	□□□□□ -0.19
PDE4DIP-233	ENST00000533845	AFG3L2	Q9Y4W6	797 aa		13.84	□□□□□ -0.19
PDE4DIP-233	ENST00000533845	ZNF532	Q9HCE3	1301 aa		13.84	□□□□□ -0.19
PDE4DIP-233	ENST00000533845	MAGEB6P1	A0A0J9YX57	407 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	FKTN	O75072	461 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	RRP1B	Q14684	758 aa	Known RBP	13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	UBE3C	Q15386	1083 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ABHD8	Q96I13	439 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.83	□□□□□ -0.2	1e-6	■■□□□ 11.9
PDE4DIP-233	ENST00000533845	DNAJC18	Q9H819	358 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PICK1	Q9NRD5	415 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PALD1	Q9ULE6	856 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ZHX2	Q9Y6X8	837 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TTC41P	Q6P2S7	1318 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	FOCAD	Q5VW36	1801 aa		13.83	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	FAM196B	A6NMK8	535 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	CAP2	P40123	477 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	USP5	P45974	858 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	DGKZ	Q13574	1117 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	CTU1	Q7Z7A3	348 aa	Known RBP	13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ANKRD23	Q86SG2	305 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	GPATCH3	Q96I76	525 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SALL3	Q9BXA9	1300 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	CDK5RAP2	Q96SN8	1893 aa		13.82	□□□□□ -0.2
PDE4DIP-233	ENST00000533845		A0A0G2JLL6	359 aa	Predicted RBP	13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	HLA-DOA	P06340	250 aa		13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PKN2	Q16513	984 aa	Known RBP	13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PI4K2B	Q8TCG2	481 aa		13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TBC1D2	Q9BYX2	928 aa		13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	EHD4	Q9H223	541 aa		13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ZFYVE28	Q9HCC9	887 aa		13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	GINM1	Q9NU53	330 aa		13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SAP30BP	Q9UHR5	308 aa	Known RBP	13.81	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SIPA1L1	O43166	1804 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TLR2	O60603	784 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TAF1C	Q15572	869 aa	Predicted RBP	13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SLFNL1	Q499Z3	407 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ZSCAN25	Q6NSZ9	544 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	GPAT2	Q6NUI2	795 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TATDN1	Q6P1N9	297 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	FASTKD5	Q7L8L6	764 aa	Known RBP	13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TTC6	Q86TZ1	520 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SMC5	Q8IY18	1101 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	LCORL	Q8N3X6	602 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	KBTBD3	Q8NAB2	608 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	EXOC6	Q8TAG9	804 aa		13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.8	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ERC2	O15083	957 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	GLRX3	O76003	335 aa	Known RBP	13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	CHGB	P05060	677 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ASNS	P08243	561 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	JAG1	P78504	1218 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SP3	Q02447	781 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	GABPA	Q06546	454 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ANKRD45	Q5TZF3	282 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TSHZ3	Q63HK5	1081 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	WDR18	Q9BV38	432 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	RWDD1	Q9H446	243 aa	Predicted RBP	13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	STAP2	Q9UGK3	403 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SERPINB13	Q9UIV8	391 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	TAOK2	Q9UL54	1235 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	SLC45A1	Q9Y2W3	748 aa		13.79	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	DOCK1	Q14185	1865 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	USP17L5	A8MUK1	530 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PDHX	O00330	501 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	MBD4	O95243	580 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	MX1	P20591	662 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PLCD1	P51178	756 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	C17orf99	Q6UX52	265 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ZNF280C	Q8ND82	737 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ERO1A	Q96HE7	468 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PUS7L	Q9H0K6	701 aa	Known RBP	13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ARMT1	Q9H993	441 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ATP8A2	Q9NTI2	1148 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	ADGRA2	Q96PE1	1338 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	PHIP	Q8WWQ0	1821 aa		13.78	□□□□□ -0.2
PDE4DIP-233	ENST00000533845	IGHD	P01880	384 aa		13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	ZFY	P08048	801 aa	Predicted RBP	13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	SPP2	Q13103	211 aa		13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	SH3D19	Q5HYK7	790 aa		13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	CCDC84	Q86UT8	332 aa	Predicted RBP	13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	SDR42E1	Q8WUS8	393 aa		13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	TRIM34	Q9BYJ4	488 aa		13.77	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	DDX60L	Q5H9U9	1706 aa	Known RBP	13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	TRIM75P	A6NK02	468 aa		13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	RNF113A	O15541	343 aa	Known RBP	13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	PRKAB2	O43741	272 aa		13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	POLR3D	P05423	398 aa	Predicted RBP	13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	SHMT1	P34896	483 aa		13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	CAP1	Q01518	475 aa		13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	OTOP1	Q7RTM1	612 aa		13.76	□□□□□ -0.21
PDE4DIP-233	ENST00000533845	APPBP2	Q92624	585 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms