RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TRIB2Q92519 343 aa15.47■□□□□ 0.07
SVIP-205ENST00000533774 SRCIN1Q9C0H9 1055 aa15.47■□□□□ 0.07
SVIP-205ENST00000533774 PEX10O60683 326 aa15.46■□□□□ 0.07
SVIP-205ENST00000533774 COL6A1P12109 1028 aa15.46■□□□□ 0.07
SVIP-205ENST00000533774 LRRC26Q2I0M4 334 aa15.46■□□□□ 0.07
SVIP-205ENST00000533774 FAM109BQ6ICB4 259 aaPredicted RBP15.46■□□□□ 0.07
SVIP-205ENST00000533774 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.07
SVIP-205ENST00000533774 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
SVIP-205ENST00000533774 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
SVIP-205ENST00000533774 PUM3Q15397 648 aaKnown RBP15.45■□□□□ 0.06
SVIP-205ENST00000533774 MAP3K21Q5TCX8 1036 aa15.45■□□□□ 0.06
SVIP-205ENST00000533774 IDI2Q9BXS1 227 aa15.45■□□□□ 0.06
SVIP-205ENST00000533774 PRDM6Q9NQX0 595 aa15.45■□□□□ 0.06
SVIP-205ENST00000533774 CTNND1O60716 968 aaKnown RBP15.44■□□□□ 0.06
SVIP-205ENST00000533774 LRRFIP2Q9Y608 721 aaKnown RBP15.44■□□□□ 0.06
SVIP-205ENST00000533774 CDH23Q9H251 3354 aa15.44■□□□□ 0.06
SVIP-205ENST00000533774 SIPA1L1O43166 1804 aa15.43■□□□□ 0.06
SVIP-205ENST00000533774 FAM196BA6NMK8 535 aa15.43■□□□□ 0.06
SVIP-205ENST00000533774 ENTPD3O75355 529 aa15.43■□□□□ 0.06
SVIP-205ENST00000533774 LDHBP07195 334 aaKnown RBP15.43■□□□□ 0.06
SVIP-205ENST00000533774 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
SVIP-205ENST00000533774 CYP2B6P20813 491 aa15.43■□□□□ 0.06
SVIP-205ENST00000533774 FBXO3Q9UK99 471 aa15.43■□□□□ 0.06
SVIP-205ENST00000533774 RLFQ13129 1914 aa15.43■□□□□ 0.06
SVIP-205ENST00000533774 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
SVIP-205ENST00000533774 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
SVIP-205ENST00000533774 RRP1BQ14684 758 aaKnown RBP15.42■□□□□ 0.06
SVIP-205ENST00000533774 LHX8Q68G74 356 aa15.42■□□□□ 0.06
SVIP-205ENST00000533774 ZSCAN29Q8IWY8 852 aaPredicted RBP15.42■□□□□ 0.06
SVIP-205ENST00000533774 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
SVIP-205ENST00000533774 ASCC2Q9H1I8 757 aaPredicted RBP15.42■□□□□ 0.06
SVIP-205ENST00000533774 GAKO14976 1311 aa15.42■□□□□ 0.06
SVIP-205ENST00000533774 SLC5A1P13866 664 aa15.41■□□□□ 0.06
SVIP-205ENST00000533774 CCND3P30281 292 aaPredicted RBP15.41■□□□□ 0.06
SVIP-205ENST00000533774 GCLCP48506 637 aaPredicted RBP15.41■□□□□ 0.06
SVIP-205ENST00000533774 HMGCS2P54868 508 aa15.41■□□□□ 0.06
SVIP-205ENST00000533774 CACNB2Q08289 660 aaPredicted RBP15.41■□□□□ 0.06
SVIP-205ENST00000533774 SPP2Q13103 211 aa15.41■□□□□ 0.06
SVIP-205ENST00000533774 ATG9AQ7Z3C6 839 aa15.41■□□□□ 0.06
SVIP-205ENST00000533774 LPIN2Q92539 896 aa15.41■□□□□ 0.06
SVIP-205ENST00000533774 CDX2Q99626 313 aaPredicted RBP15.41■□□□□ 0.06
SVIP-205ENST00000533774 PNMA3Q9UL41 463 aa15.41■□□□□ 0.06
SVIP-205ENST00000533774 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
SVIP-205ENST00000533774 PICALMQ13492 652 aa15.4■□□□□ 0.06
SVIP-205ENST00000533774 TXNRD2Q9NNW7 524 aa15.4■□□□□ 0.06
SVIP-205ENST00000533774 MORF4L1Q9UBU8 362 aa15.4■□□□□ 0.06
SVIP-205ENST00000533774 SALL2Q9Y467 1007 aaPredicted RBP15.4■□□□□ 0.06
SVIP-205ENST00000533774 MUC3AQ02505 3323 aa15.4■□□□□ 0.06
SVIP-205ENST00000533774 SALL1Q9NSC2 1324 aa15.4■□□□□ 0.06
SVIP-205ENST00000533774 EYA2O00167 538 aa15.39■□□□□ 0.05
SVIP-205ENST00000533774 PHKA1P46020 1223 aa15.39■□□□□ 0.05
SVIP-205ENST00000533774 CCL14Q16627 93 aa15.39■□□□□ 0.05
SVIP-205ENST00000533774 MAFAQ8NHW3 353 aaPredicted RBP15.39■□□□□ 0.05
SVIP-205ENST00000533774 USP6NLQ92738 828 aa15.39■□□□□ 0.05
SVIP-205ENST00000533774 POTEEQ6S8J3 1075 aa15.38■□□□□ 0.05
SVIP-205ENST00000533774 ZNF280CQ8ND82 737 aa15.38■□□□□ 0.05
SVIP-205ENST00000533774 ZNF384Q8TF68 577 aa15.38■□□□□ 0.05
SVIP-205ENST00000533774 SEMA6BQ9H3T3 888 aa15.38■□□□□ 0.05
SVIP-205ENST00000533774 TBC1D12O60347 775 aa15.37■□□□□ 0.05
SVIP-205ENST00000533774 RHBDL3P58872 404 aa15.37■□□□□ 0.05
SVIP-205ENST00000533774 SH3D19Q5HYK7 790 aa15.37■□□□□ 0.05
SVIP-205ENST00000533774 ZNF697Q5TEC3 545 aa15.37■□□□□ 0.05
SVIP-205ENST00000533774 WDR63Q8IWG1 891 aa15.37■□□□□ 0.05
SVIP-205ENST00000533774 P2RX7Q99572 595 aaKnown RBP15.37■□□□□ 0.05
SVIP-205ENST00000533774 USP44Q9H0E7 712 aa15.37■□□□□ 0.05
SVIP-205ENST00000533774 RAPGEFL1Q9UHV5 662 aa15.37■□□□□ 0.05
SVIP-205ENST00000533774 MYO9BQ13459 2157 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 XRCC5P13010 732 aaKnown RBP15.36■□□□□ 0.05
SVIP-205ENST00000533774 ADORA1P30542 326 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 BTDP43251 543 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 JAG1P78504 1218 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 Q3C1V9 767 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 MYLIPQ8WY64 445 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 NUDT12Q9BQG2 462 aa15.36■□□□□ 0.05
SVIP-205ENST00000533774 OSBPL5Q9H0X9 879 aaPredicted RBP15.36■□□□□ 0.05
SVIP-205ENST00000533774 TTYH1Q9H313 450 aaPredicted RBP15.36■□□□□ 0.05
SVIP-205ENST00000533774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.36■□□□□ 0.05
SVIP-205ENST00000533774 SHHQ15465 462 aa15.35■□□□□ 0.05
SVIP-205ENST00000533774 C9orf50Q5SZB4 431 aa15.35■□□□□ 0.05
SVIP-205ENST00000533774 MORN1Q5T089 497 aa15.35■□□□□ 0.05
SVIP-205ENST00000533774 FAM163AQ96GL9 167 aaPredicted RBP15.35■□□□□ 0.05
SVIP-205ENST00000533774 PORCNQ9H237 461 aa15.35■□□□□ 0.05
SVIP-205ENST00000533774 RBPJLQ9UBG7 517 aa15.35■□□□□ 0.05
SVIP-205ENST00000533774 DENND2AQ9ULE3 1009 aa15.35■□□□□ 0.05
SVIP-205ENST00000533774 MYO5AQ9Y4I1 1855 aaKnown RBP15.35■□□□□ 0.05
SVIP-205ENST00000533774 FOCADQ5VW36 1801 aa15.34■□□□□ 0.05
SVIP-205ENST00000533774 ZKSCAN1P17029 563 aaPredicted RBP15.34■□□□□ 0.05
SVIP-205ENST00000533774 CAP2P40123 477 aa15.34■□□□□ 0.05
SVIP-205ENST00000533774 ATN1P54259 1190 aaPredicted RBP15.34■□□□□ 0.05
SVIP-205ENST00000533774 PABPC4Q13310 644 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■■□□□ 14.4
SVIP-205ENST00000533774 SHROOM1Q2M3G4 852 aaPredicted RBP15.34■□□□□ 0.05
SVIP-205ENST00000533774 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
SVIP-205ENST00000533774 SIL1Q9H173 461 aa15.34■□□□□ 0.05
SVIP-205ENST00000533774 MROH7-TTC4A0A0A0MT08 1334 aa15.34■□□□□ 0.05
SVIP-205ENST00000533774 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.04
SVIP-205ENST00000533774 USP17L5A8MUK1 530 aa15.33■□□□□ 0.04
SVIP-205ENST00000533774 COL9A1P20849 921 aa15.33■□□□□ 0.04
SVIP-205ENST00000533774 HERVK_113P62684 666 aa15.33■□□□□ 0.04
SVIP-205ENST00000533774 RASGRF1Q13972 1273 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms