RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 IL2RAP01589 272 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 ANXA1P04083 346 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 SERPINB2P05120 415 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 TGFB2P61812 414 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 RAD51AP2Q09MP3 1159 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 AIMP1Q12904 312 aaKnown RBP9.71□□□□□ -0.86
CASP4-212ENST00000533730 PARP10Q53GL7 1025 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 BICDL1Q6ZP65 573 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 TNS4Q8IZW8 715 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 PLBD2Q8NHP8 589 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 PIK3R5Q8WYR1 880 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 KIFC2Q96AC6 838 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 XAGE2Q96GT9 111 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 SPATA32Q96LK8 384 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 SAP130Q9H0E3 1048 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 RAB6BQ9NRW1 208 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 NIP7Q9Y221 180 aaKnown RBP eCLIP9.71□□□□□ -0.86
CASP4-212ENST00000533730 ZBED9Q6R2W3 1325 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 SNRPBP14678 240 aaKnown RBP9.7□□□□□ -0.86
CASP4-212ENST00000533730 HLFQ16534 295 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
CASP4-212ENST00000533730 TRMT2AQ8IZ69 625 aaKnown RBP9.7□□□□□ -0.86
CASP4-212ENST00000533730 CNBD1Q8NA66 436 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 VTI1AQ96AJ9 217 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 NYXQ9GZU5 481 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 RNF19AQ9NV58 838 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 IBTKQ9P2D0 1353 aaPredicted RBP9.7□□□□□ -0.86
CASP4-212ENST00000533730 NRXN2Q9P2S2 1712 aa9.7□□□□□ -0.86
CASP4-212ENST00000533730 CACNA1FO60840 1977 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 LDHBP07195 334 aaKnown RBP9.69□□□□□ -0.86
CASP4-212ENST00000533730 MAPK8P45983 427 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 RNF144AP50876 292 aaPredicted RBP9.69□□□□□ -0.86
CASP4-212ENST00000533730 ST5P78524 1137 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 TCIRG1Q13488 830 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 DSC3Q14574 896 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 RNF123Q5XPI4 1314 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 PPP1R42Q7Z4L9 355 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 DUSP9Q99956 384 aaKnown RBP9.69□□□□□ -0.86
CASP4-212ENST00000533730 KIF13BQ9NQT8 1826 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 PARP2Q9UGN5 583 aa9.69□□□□□ -0.86
CASP4-212ENST00000533730 NUP98P52948 1817 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 TTLL8A6PVC2 850 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 INHAP05111 366 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
CASP4-212ENST00000533730 GPC1P35052 558 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 GDF10P55107 478 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 TMEM87AQ8NBN3 555 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 BRIP1Q9BX63 1249 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 TSPAN10Q9H1Z9 355 aaPredicted RBP9.68□□□□□ -0.86
CASP4-212ENST00000533730 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
CASP4-212ENST00000533730 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
CASP4-212ENST00000533730 MEN1O00255 615 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 FZD6O60353 706 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
CASP4-212ENST00000533730 GPTP24298 496 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 PDE6BP35913 854 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 EIF1AXP47813 144 aaKnown RBP9.67□□□□□ -0.86
CASP4-212ENST00000533730 PLCB3Q01970 1234 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 NEXNQ0ZGT2 675 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 TRIM28Q13263 835 aaKnown RBP9.67□□□□□ -0.86
CASP4-212ENST00000533730 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 PRR5LQ6MZQ0 368 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 C16orf46Q6P387 395 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 METTL16Q86W50 562 aaKnown RBP9.67□□□□□ -0.86
CASP4-212ENST00000533730 NT5DC4Q86YG4 428 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 NLGN2Q8NFZ4 835 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 RNF217Q8TC41 542 aa9.67□□□□□ -0.86
CASP4-212ENST00000533730 AFDNP55196 1824 aaKnown RBP9.67□□□□□ -0.86
CASP4-212ENST00000533730 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 RIC1Q4ADV7 1423 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 ANKRD36CQ5JPF3 1778 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 UBN2Q6ZU65 1347 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 TCERG1O14776 1098 aaKnown RBP9.66□□□□□ -0.86
CASP4-212ENST00000533730 EHHADHQ08426 723 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 AAMPQ13685 434 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 CITED4Q96RK1 184 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 ISCA1Q9BUE6 129 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 METTL22Q9BUU2 404 aaPredicted RBP9.66□□□□□ -0.86
CASP4-212ENST00000533730 UTP14AQ9BVJ6 771 aaKnown RBP9.66□□□□□ -0.86
CASP4-212ENST00000533730 GRIP2Q9C0E4 1043 aa9.66□□□□□ -0.86
CASP4-212ENST00000533730 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
CASP4-212ENST00000533730 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 H0YIN7 160 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 BACH1O14867 736 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 GPR182O15218 404 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 NTSR2O95665 410 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 IGHA2P01877 340 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 EPHA4P54764 986 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 CENPCQ03188 943 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 SUSD4Q5VX71 490 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 TMC4Q7Z404 712 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 NLRP10Q86W26 655 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
CASP4-212ENST00000533730 CCDC191Q8NCU4 936 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms