RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 DDX4Q9NQI0 724 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 HMGB1P09429 215 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 DMTNQ08495 405 aa12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 TTC6Q86TZ1 520 aa12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 TDRD3Q9H7E2 651 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 CNNM2Q9H8M5 875 aa12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
CAPRIN1-215ENST00000533657 ATAD5Q96QE3 1844 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 SHTN1A0MZ66 631 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 TBC1D12O60347 775 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 PSMA5P28066 241 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 GABPAQ06546 454 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 PANK2Q9BZ23 570 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 POTECB2RU33 542 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 APPP05067 770 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 EPS15P42566 896 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 RABEP1Q15276 862 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 TRPM4Q8TD43 1214 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 FAM13BQ9NYF5 915 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
CAPRIN1-215ENST00000533657 NFIAQ12857 509 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 ZNF287Q9HBT7 754 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 MCM9Q9NXL9 1143 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 DOCK1Q14185 1865 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 USP17L12C9JPN9 530 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 USP17L21D6R901 530 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 E7EWF7 191 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 EPHX2P34913 555 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 HIRAP54198 1017 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 HOOK2Q96ED9 719 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 KRT23Q9C075 422 aa12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 TAF1DQ9H5J8 278 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-215ENST00000533657 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 TBC1D10CQ8IV04 446 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 FOXP4Q8IVH2 680 aaPredicted RBP12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 HERC5Q9UII4 1024 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 EGFRP00533 1210 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 TBC1D10BQ4KMP7 808 aaPredicted RBP12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 SH3BP5LQ7L8J4 393 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 ANP32BQ92688 251 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 PI4KBQ9UBF8 816 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 MB21D2Q8IYB1 491 aaPredicted RBP12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 TEPSINQ96N21 525 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 GINM1Q9NU53 330 aa12.13□□□□□ -0.47
CAPRIN1-215ENST00000533657 PDE4BQ07343 736 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 TMEM51Q9NW97 253 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 OTOFQ9HC10 1997 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 KIF20AO95235 890 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 NEK1Q96PY6 1258 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
CAPRIN1-215ENST00000533657 EXOSC10Q01780 885 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 CCDC178Q5BJE1 867 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 MFSD6Q6ZSS7 791 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 SNX21Q969T3 373 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 SSC5DA1L4H1 1573 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 NOVP48745 357 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 PLCD1P51178 756 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 PICALMQ13492 652 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 TTC14Q96N46 770 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 ISY1Q9ULR0 285 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 TAF6LQ9Y6J9 622 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 NEDD4P46934 1319 aa12.11□□□□□ -0.47
CAPRIN1-215ENST00000533657 TRPM7Q96QT4 1865 aa12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 DDTLA6NHG4 134 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 CYP2D6P10635 497 aa12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 ANGEL2Q5VTE6 544 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 NID2Q14112 1375 aa12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 TRDNQ13061 729 aa12.1□□□□□ -0.47
CAPRIN1-215ENST00000533657 BECN1Q14457 450 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms