RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 MAPKAPK5Q8IW41 473 aa20.69■□□□□ 0.9
CTSB-229ENST00000533572 MIGA1Q8NAN2 632 aa20.69■□□□□ 0.9
CTSB-229ENST00000533572 TGFBRAP1Q8WUH2 860 aa20.69■□□□□ 0.9
CTSB-229ENST00000533572 ATRNL1Q5VV63 1379 aa20.69■□□□□ 0.9
CTSB-229ENST00000533572 CASP8AP2Q9UKL3 1982 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 CCL15-CCL14A0A0B4J2E2 113 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 RNF113AO15541 343 aaKnown RBP20.68■□□□□ 0.9
CTSB-229ENST00000533572 PDE6AP16499 860 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 ADD2P35612 726 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 PPIL2Q13356 520 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 CCL15Q16663 113 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 TRIM34Q9BYJ4 488 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 DHX36Q9H2U1 1008 aaKnown RBP20.68■□□□□ 0.9
CTSB-229ENST00000533572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.68■□□□□ 0.93e-7■□□□□ 9.8
CTSB-229ENST00000533572 PICK1Q9NRD5 415 aa20.68■□□□□ 0.9
CTSB-229ENST00000533572 USP5P45974 858 aa20.67■□□□□ 0.9
CTSB-229ENST00000533572 DYNLL1P63167 89 aaKnown RBP20.67■□□□□ 0.9
CTSB-229ENST00000533572 PPATQ06203 517 aa20.67■□□□□ 0.9
CTSB-229ENST00000533572 SNAPC2Q13487 334 aa20.67■□□□□ 0.9
CTSB-229ENST00000533572 NOL9Q5SY16 702 aaKnown RBP20.67■□□□□ 0.9
CTSB-229ENST00000533572 SKAP1Q86WV1 359 aa20.67■□□□□ 0.9
CTSB-229ENST00000533572 IGF2BP3O00425 579 aaKnown RBP eCLIP20.66■□□□□ 0.9
CTSB-229ENST00000533572 CETPP11597 493 aa20.66■□□□□ 0.9
CTSB-229ENST00000533572 CASC1Q6TDU7 716 aa20.66■□□□□ 0.9
CTSB-229ENST00000533572 SCYL3Q8IZE3 742 aa20.66■□□□□ 0.9
CTSB-229ENST00000533572 APPBP2Q92624 585 aa20.66■□□□□ 0.9
CTSB-229ENST00000533572 FLT1P17948 1338 aa20.66■□□□□ 0.9
CTSB-229ENST00000533572 ZNF532Q9HCE3 1301 aa20.66■□□□□ 0.9
CTSB-229ENST00000533572 MAGEB6P1A0A0J9YX57 407 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 TESPA1A2RU30 521 aaPredicted RBP20.65■□□□□ 0.9
CTSB-229ENST00000533572 IRF6O14896 467 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 TBC1D12O60347 775 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 HLA-DOAP06340 250 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 RUFY2Q8WXA3 655 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 MS4A4AQ96JQ5 239 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 CFHR5Q9BXR6 569 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 DIAPH3Q9NSV4 1193 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 PI4KBQ9UBF8 816 aa20.65■□□□□ 0.9
CTSB-229ENST00000533572 LAMB1P07942 1786 aa20.64■□□□□ 0.9
CTSB-229ENST00000533572 TCRBV5S4A2TA0A5A2 114 aa20.64■□□□□ 0.89
CTSB-229ENST00000533572 CTNND1O60716 968 aaKnown RBP20.64■□□□□ 0.89
CTSB-229ENST00000533572 MAP3K10Q02779 954 aa20.64■□□□□ 0.89
CTSB-229ENST00000533572 CRACR2BQ8N4Y2 399 aaPredicted RBP20.64■□□□□ 0.89
CTSB-229ENST00000533572 BRI3BPQ8WY22 251 aa20.64■□□□□ 0.89
CTSB-229ENST00000533572 HELLSQ9NRZ9 838 aa20.64■□□□□ 0.89
CTSB-229ENST00000533572 HERC5Q9UII4 1024 aaKnown RBP20.64■□□□□ 0.89
CTSB-229ENST00000533572 FAM196BA6NMK8 535 aa20.63■□□□□ 0.89
CTSB-229ENST00000533572 PHF20L1A8MW92 1017 aa20.63■□□□□ 0.89
CTSB-229ENST00000533572 GPR25O00155 361 aa20.63■□□□□ 0.89
CTSB-229ENST00000533572 MFAP1P55081 439 aaKnown RBP20.63■□□□□ 0.89
CTSB-229ENST00000533572 DGKZQ13574 1117 aa20.63■□□□□ 0.89
CTSB-229ENST00000533572 CRNKL1Q9BZJ0 848 aaKnown RBP20.63■□□□□ 0.89
CTSB-229ENST00000533572 SAP30BPQ9UHR5 308 aaKnown RBP20.63■□□□□ 0.89
CTSB-229ENST00000533572 EIF5BO60841 1220 aaKnown RBP20.62■□□□□ 0.89
CTSB-229ENST00000533572 TAF1CQ15572 869 aaPredicted RBP20.62■□□□□ 0.89
CTSB-229ENST00000533572 NOM1Q5C9Z4 860 aaKnown RBP20.62■□□□□ 0.89
CTSB-229ENST00000533572 ZMYM1Q5SVZ6 1142 aa20.62■□□□□ 0.89
CTSB-229ENST00000533572 ZNF296Q8WUU4 475 aaPredicted RBP20.62■□□□□ 0.89
CTSB-229ENST00000533572 PTPN18Q99952 460 aa20.62■□□□□ 0.89
CTSB-229ENST00000533572 RAD50Q92878 1312 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 FKTNO75072 461 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 CDC45O75419 566 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 SLURP2P0DP57 97 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 ZFYVE28Q9HCC9 887 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 PALD1Q9ULE6 856 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 ZHX2Q9Y6X8 837 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 MYH7P12883 1935 aa20.61■□□□□ 0.89
CTSB-229ENST00000533572 CDK5RAP2Q96SN8 1893 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 FOCADQ5VW36 1801 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 PTPRAP18433 802 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 GNAT2P19087 354 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 CHMLP26374 656 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 CRHR2Q13324 411 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 CTU1Q7Z7A3 348 aaKnown RBP20.6■□□□□ 0.89
CTSB-229ENST00000533572 FOXP4Q8IVH2 680 aaPredicted RBP20.6■□□□□ 0.89
CTSB-229ENST00000533572 RIOK1Q9BRS2 568 aaKnown RBP20.6■□□□□ 0.89
CTSB-229ENST00000533572 KCNH4Q9UQ05 1017 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 DOCK1Q14185 1865 aa20.6■□□□□ 0.89
CTSB-229ENST00000533572 CXCL11O14625 94 aa20.59■□□□□ 0.89
CTSB-229ENST00000533572 SLC4A8Q2Y0W8 1093 aa20.59■□□□□ 0.89
CTSB-229ENST00000533572 TTC6Q86TZ1 520 aa20.59■□□□□ 0.89
CTSB-229ENST00000533572 MCOLN1Q9GZU1 580 aa20.59■□□□□ 0.89
CTSB-229ENST00000533572 ZCCHC17Q9NP64 241 aaKnown RBP20.59■□□□□ 0.89
CTSB-229ENST00000533572 BTBD19C9JJ37 291 aa20.58■□□□□ 0.89
CTSB-229ENST00000533572 CAP2P40123 477 aa20.58■□□□□ 0.89
CTSB-229ENST00000533572 FAM43AQ8N2R8 423 aa20.58■□□□□ 0.89
CTSB-229ENST00000533572 OSBP2Q969R2 916 aa20.58■□□□□ 0.89
CTSB-229ENST00000533572 R3HDMLQ9H3Y0 253 aa20.58■□□□□ 0.89
CTSB-229ENST00000533572 MYH1P12882 1939 aa20.57■□□□□ 0.88
CTSB-229ENST00000533572 MBD4O95243 580 aa20.57■□□□□ 0.88
CTSB-229ENST00000533572 POLR3DP05423 398 aaPredicted RBP20.57■□□□□ 0.88
CTSB-229ENST00000533572 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
CTSB-229ENST00000533572 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
CTSB-229ENST00000533572 LCORLQ8N3X6 602 aa20.57■□□□□ 0.88
CTSB-229ENST00000533572 DDRGK1Q96HY6 314 aa20.57■□□□□ 0.88
CTSB-229ENST00000533572 ABHD8Q96I13 439 aa20.57■□□□□ 0.88
CTSB-229ENST00000533572 TBC1D2Q9BYX2 928 aa20.57■□□□□ 0.88
CTSB-229ENST00000533572 PUS7LQ9H0K6 701 aaKnown RBP20.57■□□□□ 0.88
CTSB-229ENST00000533572 GPAA1O43292 621 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms