RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.92■□□□□ 0.3
CAPN1-224ENST00000533129 ADAM21Q9UKJ8 722 aa16.92■□□□□ 0.3
CAPN1-224ENST00000533129 KCNQ2O43526 872 aa16.92■□□□□ 0.3
CAPN1-224ENST00000533129 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
CAPN1-224ENST00000533129 HNRNPLLQ8WVV9 542 aaKnown RBP16.92■□□□□ 0.3
CAPN1-224ENST00000533129 DHX58Q96C10 678 aa16.92■□□□□ 0.3
CAPN1-224ENST00000533129 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 CCDC102BQ68D86 513 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 RASSF4Q9H2L5 321 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 AFF2P51816 1311 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 CUTAO60888 179 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 NCOA7Q8NI08 942 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 OSBP2Q969R2 916 aa16.91■□□□□ 0.3
CAPN1-224ENST00000533129 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.91■□□□□ 0.3
CAPN1-224ENST00000533129 FOXP2O15409 715 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 ANTXR2P58335 489 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 TIMM10P62072 90 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 ITPK1Q13572 414 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 HLFQ16534 295 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 PCDHA5Q9Y5H7 936 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 ATRNO75882 1429 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 ZNF18P17022 549 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 PDILTQ8N807 584 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 CNNM3Q8NE01 707 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 PLA2G12BQ9BX93 195 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 CDHR2Q9BYE9 1310 aa16.9■□□□□ 0.3
CAPN1-224ENST00000533129 H3BQF6 201 aa16.89■□□□□ 0.3
CAPN1-224ENST00000533129 POTEB2H3BUK9 544 aa16.89■□□□□ 0.3
CAPN1-224ENST00000533129 PTPN21Q16825 1174 aa16.89■□□□□ 0.3
CAPN1-224ENST00000533129 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.3
CAPN1-224ENST00000533129 RALYLQ86SE5 291 aaKnown RBP16.89■□□□□ 0.3
CAPN1-224ENST00000533129 NLRP10Q86W26 655 aa16.89■□□□□ 0.3
CAPN1-224ENST00000533129 FOXP4Q8IVH2 680 aaPredicted RBP16.89■□□□□ 0.3
CAPN1-224ENST00000533129 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.3
CAPN1-224ENST00000533129 HOOK1Q9UJC3 728 aaKnown RBP16.89■□□□□ 0.3
CAPN1-224ENST00000533129 ZMYM6O95789 1325 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 COL5A3P25940 1745 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-224ENST00000533129 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-224ENST00000533129 BMP6P22004 513 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 HAND2P61296 217 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 PDE4BQ07343 736 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 LONRF3Q496Y0 759 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 ALG1Q9BT22 464 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 NHSQ6T4R5 1651 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 MYO1CO00159 1063 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 CDKL5O76039 1030 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 ACTN2P35609 894 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 USP5P45974 858 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 CHMP4BP1P59074 171 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 TUBB4BP68371 445 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 DACH1Q9UI36 760 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 TRPC5Q9UL62 973 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-224ENST00000533129 KCNH3Q9ULD8 1083 aa16.89■□□□□ 0.29
CAPN1-224ENST00000533129 FGAP02671 866 aa16.88■□□□□ 0.29
CAPN1-224ENST00000533129 CCDC175P0C221 793 aa16.88■□□□□ 0.29
CAPN1-224ENST00000533129 CDC27P30260 824 aa16.88■□□□□ 0.29
CAPN1-224ENST00000533129 LMAN1P49257 510 aa16.88■□□□□ 0.29
CAPN1-224ENST00000533129 ADKP55263 362 aaKnown RBP16.88■□□□□ 0.29
CAPN1-224ENST00000533129 KRT40Q6A162 431 aa16.88■□□□□ 0.29
CAPN1-224ENST00000533129 ENOX1Q8TC92 643 aaKnown RBP16.88■□□□□ 0.29
CAPN1-224ENST00000533129 RAB21Q9UL25 225 aa16.88■□□□□ 0.29
CAPN1-224ENST00000533129 TBC1D2BQ9UPU7 963 aa16.88■□□□□ 0.29
CAPN1-224ENST00000533129 NUP98P52948 1817 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-224ENST00000533129 PDE4CQ08493 712 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 SRLQ86TD4 932 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 RAB11FIP4Q86YS3 637 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 CEP112Q8N8E3 955 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 NFE2L3Q9Y4A8 694 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 A0A1B0GUL7 405 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-224ENST00000533129 GPTP24298 496 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 HDXQ7Z353 690 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 MSANTD4Q8NCY6 345 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 CLIC6Q96NY7 704 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 PANX2Q96RD6 677 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 MRPL44Q9H9J2 332 aaKnown RBP16.87■□□□□ 0.29
CAPN1-224ENST00000533129 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 RAI14Q9P0K7 980 aa16.87■□□□□ 0.29
CAPN1-224ENST00000533129 MYH7P12883 1935 aa16.86■□□□□ 0.29
CAPN1-224ENST00000533129 EYA2O00167 538 aa16.86■□□□□ 0.29
CAPN1-224ENST00000533129 IVLP07476 585 aa16.86■□□□□ 0.29
CAPN1-224ENST00000533129 GYS2P54840 703 aa16.86■□□□□ 0.29
CAPN1-224ENST00000533129 KARSQ15046 597 aaKnown RBP16.86■□□□□ 0.29
CAPN1-224ENST00000533129 BEND6Q5SZJ8 279 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-224ENST00000533129 NT5DC1Q5TFE4 455 aa16.86■□□□□ 0.29
CAPN1-224ENST00000533129 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
CAPN1-224ENST00000533129 DESI2Q9BSY9 194 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms