RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 GLG1Q92896 1179 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 ATP8A2Q9NTI2 1148 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 ARHGEF16Q5VV41 709 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
COLCA1-203ENST00000532918 ABCA8O94911 1581 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 HECW2Q9P2P5 1572 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 ZEB2O60315 1214 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 KRT83P78385 493 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 AKNAD1Q5T1N1 836 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 PLEKHM2Q8IWE5 1019 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 RPS6KB1P23443 525 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 ZAP70P43403 619 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 AK2P54819 239 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 NCAPH2Q6IBW4 605 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 PPM1EQ8WY54 764 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 DNM3Q9UQ16 869 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.48
COLCA1-203ENST00000532918 KCTD2Q14681 263 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 USH1GQ495M9 461 aa12.02□□□□□ -0.48
COLCA1-203ENST00000532918 KDM6BO15054 1643 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 PRDM1O75626 825 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 NPR1P16066 1061 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 ZNF174Q15697 407 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 RNF187Q5TA31 235 aaPredicted RBP12.02□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC17Q96LX7 622 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 AATKQ6ZMQ8 1374 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
COLCA1-203ENST00000532918 TACC1O75410 805 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 RXRAP19793 462 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 ANKRD35Q8N283 1001 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 RNF34Q969K3 372 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC77Q9BR77 488 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 ADGBQ8N7X0 1667 aa12.02□□□□□ -0.49
COLCA1-203ENST00000532918 GTF2F1P35269 517 aaKnown RBP eCLIP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 CHRNDQ07001 517 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 SMC5Q8IY18 1101 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 NACA2Q9H009 215 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 SWAP70Q9UH65 585 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 AFF2P51816 1311 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 P4HA1P13674 534 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 ATP5JP18859 108 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 PPARAQ07869 468 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 PIK3AP1Q6ZUJ8 805 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 PPP1R14CQ8TAE6 165 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 IWS1Q96ST2 819 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 MAK16Q9BXY0 300 aaKnown RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 METP08581 1390 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 VWA3AA6NCI4 1184 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 H0YCG3 227 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 BTDP43251 543 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 IREB2P48200 963 aaKnown RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 VWA3BQ502W6 1294 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 TTLL6Q8N841 843 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 NCAPG2Q86XI2 1143 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 ABT1Q9ULW3 272 aaKnown RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 ATP7BP35670 1465 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 YWHAEP62258 255 aaKnown RBP12.01□□□□□ -0.49
COLCA1-203ENST00000532918 PDE4DQ08499 809 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 DSCC1Q9BVC3 393 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 RTEL1Q9NZ71 1219 aa12.01□□□□□ -0.49
COLCA1-203ENST00000532918 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
COLCA1-203ENST00000532918 TSPOAP1O95153 1857 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 ERVV-1B6SEH8 477 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 POLR2MP0CAP2 368 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 ICA1Q05084 483 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 DPP9Q86TI2 863 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 ATP10DQ9P241 1426 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 KMT5BQ4FZB7 885 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 SNX21Q969T3 373 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 ELP1O95163 1332 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 HMGB1P1B2RPK0 211 aaPredicted RBP12□□□□□ -0.49
COLCA1-203ENST00000532918 TRAF5O00463 557 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 SCNN1DP51172 638 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 SEPT6Q14141 434 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 RSPH3Q86UC2 560 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 ZBTB8OSQ8IWT0 167 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
COLCA1-203ENST00000532918 SLC27A2O14975 620 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 ALAS1P13196 640 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 ARID4AP29374 1257 aaPredicted RBP12□□□□□ -0.49
COLCA1-203ENST00000532918 TXKP42681 527 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 DCAF17Q5H9S7 520 aaPredicted RBP12□□□□□ -0.49
COLCA1-203ENST00000532918 GSTA5Q7RTV2 222 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC50Q8IVM0 306 aa12□□□□□ -0.49
COLCA1-203ENST00000532918 REXO1Q8N1G1 1221 aaKnown RBP12□□□□□ -0.49
COLCA1-203ENST00000532918 CCDC42Q96M95 316 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms