RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 CBX8Q9HC52 389 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 BIVM-ERCC5R4GMW8 1640 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 YWHAEP62258 255 aaKnown RBP8.45□□□□□ -1.06
CTNND1-233ENST00000532787 TFCP2Q12800 502 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 UTP14CQ5TAP6 766 aaKnown RBP8.45□□□□□ -1.06
CTNND1-233ENST00000532787 TPTE2Q6XPS3 522 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 SDCCAG8Q86SQ7 713 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-233ENST00000532787 HOMEZQ8IX15 550 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 TMOD4Q9NZQ9 345 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 ANGEL1Q9UNK9 670 aaKnown RBP8.45□□□□□ -1.06
CTNND1-233ENST00000532787 FAN1Q9Y2M0 1017 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 NPATQ14207 1427 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 ZNF853P0CG23 659 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 KRT5P13647 590 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 HPDP32754 393 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-233ENST00000532787 EIF4A2Q14240 407 aaKnown RBP8.45□□□□□ -1.06
CTNND1-233ENST00000532787 KIFC2Q96AC6 838 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 RUNDC3BQ96NL0 473 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 CARD6Q9BX69 1037 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 VCX3AQ9NNX9 186 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 MSH6P52701 1360 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 ZMYM4Q5VZL5 1548 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 UGGT2Q9NYU1 1516 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 U2AF2P26368 475 aaKnown RBP eCLIP8.45□□□□□ -1.061e-10■■□□□ 14
CTNND1-233ENST00000532787 GRK7Q8WTQ7 553 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 TBC1D31Q96DN5 1066 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 TACC3Q9Y6A5 838 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 ABCC1P33527 1531 aa8.45□□□□□ -1.06
CTNND1-233ENST00000532787 GIPC1O14908 333 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 RPS6KA1Q15418 735 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 PHLDB3Q6NSJ2 640 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 KDM2BQ8NHM5 1336 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 APPBP2Q92624 585 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 ZNF622Q969S3 477 aaKnown RBP eCLIP8.44□□□□□ -1.063e-7■□□□□ 10.1
CTNND1-233ENST00000532787 RABGAP1Q9Y3P9 1069 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 IRS4O14654 1257 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 ATP8B1O43520 1251 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 SLC8A1P32418 973 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 HSPA1LP34931 641 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 MAGEA1P43355 309 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 PARP10Q53GL7 1025 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 TTC38Q5R3I4 469 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 C16orf71Q8IYS4 520 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 TRIM58Q8NG06 486 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 IGSF3O75054 1194 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 STRN3Q13033 797 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 SFMBT2Q5VUG0 894 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 DENND2CQ68D51 928 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 ATP2A3Q93084 1043 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 NIP7Q9Y221 180 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 POSTNQ15063 836 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 ZNF174Q15697 407 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 TRIML1Q8N9V2 468 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 KDM3AQ9Y4C1 1321 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 ZBTB7BO15156 539 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 LUC7L3O95232 432 aaKnown RBP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 DZIP3Q86Y13 1208 aaKnown RBP8.44□□□□□ -1.06
CTNND1-233ENST00000532787 IWS1Q96ST2 819 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 VPS16Q9H269 839 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 Q9H521 79 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 MED4Q9NPJ6 270 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 DDX21Q9NR30 783 aaKnown RBP eCLIP8.44□□□□□ -1.064e-6■□□□□ 11.2
CTNND1-233ENST00000532787 SNX14Q9Y5W7 946 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 UHRF1BP1LA0JNW5 1464 aa8.44□□□□□ -1.06
CTNND1-233ENST00000532787 IBTKQ9P2D0 1353 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 ZNF202O95125 648 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 OAS2P29728 719 aaKnown RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 AP1ARQ63HQ0 302 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 ARHGEF2Q92974 986 aaKnown RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 HVCN1Q96D96 273 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 SH3BP5O60239 455 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 PHBP35232 272 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 ZNF131P52739 623 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 BIRC3Q13489 604 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 PICALMQ13492 652 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 ELF2Q15723 593 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 LETM2Q2VYF4 491 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 NT5C3AQ9H0P0 336 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 PCDH11XQ9BZA7 1347 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 PCDH11YQ9BZA8 1340 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 EYA2O00167 538 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 BRD2P25440 801 aaKnown RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 HOXA7P31268 230 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 NONOQ15233 471 aaKnown RBP eCLIP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 PUM3Q15397 648 aaKnown RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 UAP1Q16222 522 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 MTHFSDQ2M296 383 aaKnown RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 LRCH2Q5VUJ6 765 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 SEPT14Q6ZU15 432 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 BBOF1Q8ND07 529 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 ASIC3Q9UHC3 531 aa8.43□□□□□ -1.06
CTNND1-233ENST00000532787 PA2G4Q9UQ80 394 aaKnown RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 GPATCH8Q9UKJ3 1502 aaKnown RBP8.43□□□□□ -1.06
CTNND1-233ENST00000532787 SGSM2O43147 1006 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms