RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 GADL1Q6ZQY3 521 aa28.11■■■□□ 2.09
LTBP3-220ENST00000532661 CENPFP49454 3210 aa28.1■■■□□ 2.09
LTBP3-220ENST00000532661 MAST2Q6P0Q8 1798 aa28.1■■■□□ 2.09
LTBP3-220ENST00000532661 TRIM75PA6NK02 468 aa28.1■■■□□ 2.09
LTBP3-220ENST00000532661 CTGFP29279 349 aa28.1■■■□□ 2.09
LTBP3-220ENST00000532661 KIF22Q14807 665 aa28.1■■■□□ 2.09
LTBP3-220ENST00000532661 BCL11AQ9H165 835 aa28.1■■■□□ 2.09
LTBP3-220ENST00000532661 MYO5AQ9Y4I1 1855 aaKnown RBP28.09■■■□□ 2.09
LTBP3-220ENST00000532661 FASTKD5Q7L8L6 764 aaKnown RBP28.09■■■□□ 2.09
LTBP3-220ENST00000532661 MIGA1Q8NAN2 632 aa28.09■■■□□ 2.09
LTBP3-220ENST00000532661 ARMC5Q96C12 935 aa28.09■■■□□ 2.09
LTBP3-220ENST00000532661 FLT1P17948 1338 aa28.09■■■□□ 2.09
LTBP3-220ENST00000532661 ZSWIM8A7E2V4 1837 aa28.08■■■□□ 2.09
LTBP3-220ENST00000532661 POTEFA5A3E0 1075 aa28.08■■■□□ 2.09
LTBP3-220ENST00000532661 MAGEB6Q8N7X4 407 aa28.08■■■□□ 2.09
LTBP3-220ENST00000532661 PARK7Q99497 189 aaKnown RBP28.08■■■□□ 2.09
LTBP3-220ENST00000532661 PI4KBQ9UBF8 816 aa28.08■■■□□ 2.09
LTBP3-220ENST00000532661 DOCK1Q14185 1865 aa28.07■■■□□ 2.08
LTBP3-220ENST00000532661 IGSF3O75054 1194 aa28.07■■■□□ 2.08
LTBP3-220ENST00000532661 HMMRO75330 724 aa28.07■■■□□ 2.08
LTBP3-220ENST00000532661 CAP2P40123 477 aa28.07■■■□□ 2.08
LTBP3-220ENST00000532661 KIF1BPQ96EK5 621 aa28.07■■■□□ 2.08
LTBP3-220ENST00000532661 DHX36Q9H2U1 1008 aaKnown RBP28.07■■■□□ 2.08
LTBP3-220ENST00000532661 HERC5Q9UII4 1024 aaKnown RBP28.07■■■□□ 2.08
LTBP3-220ENST00000532661 PALD1Q9ULE6 856 aa28.07■■■□□ 2.08
LTBP3-220ENST00000532661 CLASRPQ8N2M8 674 aaKnown RBP28.06■■■□□ 2.08
LTBP3-220ENST00000532661 SAP30BPQ9UHR5 308 aaKnown RBP28.06■■■□□ 2.08
LTBP3-220ENST00000532661 PSMC4P43686 418 aa28.05■■■□□ 2.08
LTBP3-220ENST00000532661 SPP2Q13103 211 aa28.05■■■□□ 2.08
LTBP3-220ENST00000532661 SLC4A8Q2Y0W8 1093 aa28.05■■■□□ 2.08
LTBP3-220ENST00000532661 TRIM47Q96LD4 638 aa28.05■■■□□ 2.08
LTBP3-220ENST00000532661 DNAJC18Q9H819 358 aa28.05■■■□□ 2.08
LTBP3-220ENST00000532661 BCRP11274 1271 aa28.04■■■□□ 2.08
LTBP3-220ENST00000532661 JAG1P78504 1218 aa28.04■■■□□ 2.08
LTBP3-220ENST00000532661 MAP3K12Q12852 859 aa28.04■■■□□ 2.08
LTBP3-220ENST00000532661 SLC9C1Q4G0N8 1177 aa28.04■■■□□ 2.08
LTBP3-220ENST00000532661 PHIPQ8WWQ0 1821 aa28.04■■■□□ 2.08
LTBP3-220ENST00000532661 PDE3AQ14432 1141 aa28.03■■■□□ 2.08
LTBP3-220ENST00000532661 TREML2Q5T2D2 321 aa28.03■■■□□ 2.08
LTBP3-220ENST00000532661 ZNF333Q96JL9 665 aa28.03■■■□□ 2.08
LTBP3-220ENST00000532661 CHMP4BQ9H444 224 aaKnown RBP28.03■■■□□ 2.08
LTBP3-220ENST00000532661 FMNL1O95466 1100 aaPredicted RBP28.02■■■□□ 2.08
LTBP3-220ENST00000532661 IFIT2P09913 472 aaKnown RBP28.02■■■□□ 2.08
LTBP3-220ENST00000532661 SHROOM1Q2M3G4 852 aaPredicted RBP28.02■■■□□ 2.08
LTBP3-220ENST00000532661 METTL16Q86W50 562 aaKnown RBP28.02■■■□□ 2.08
LTBP3-220ENST00000532661 FOXP4Q8IVH2 680 aaPredicted RBP28.02■■■□□ 2.08
LTBP3-220ENST00000532661 ZNF280CQ8ND82 737 aa28.02■■■□□ 2.08
LTBP3-220ENST00000532661 SH3TC2Q8TF17 1288 aa28.02■■■□□ 2.08
LTBP3-220ENST00000532661 AGTPBP1Q9UPW5 1226 aa28.02■■■□□ 2.08
LTBP3-220ENST00000532661 SLC45A1Q9Y2W3 748 aa28.02■■■□□ 2.08
LTBP3-220ENST00000532661 SIPA1L1O43166 1804 aa28.02■■■□□ 2.08
LTBP3-220ENST00000532661 USP17L5A8MUK1 530 aa28.01■■■□□ 2.07
LTBP3-220ENST00000532661 RAB11FIP3O75154 756 aa28.01■■■□□ 2.07
LTBP3-220ENST00000532661 MYCP01106 439 aaPredicted RBP28.01■■■□□ 2.07
LTBP3-220ENST00000532661 GNRH1P01148 92 aa28.01■■■□□ 2.07
LTBP3-220ENST00000532661 OSBPP22059 807 aa28.01■■■□□ 2.07
LTBP3-220ENST00000532661 CRACR2BQ8N4Y2 399 aaPredicted RBP28.01■■■□□ 2.07
LTBP3-220ENST00000532661 USP5P45974 858 aa28■■■□□ 2.07
LTBP3-220ENST00000532661 DNAJC2Q99543 621 aaKnown RBP28■■■□□ 2.07
LTBP3-220ENST00000532661 SRRDQ9UH36 339 aa28■■■□□ 2.07
LTBP3-220ENST00000532661 GDF11O95390 407 aa27.99■■■□□ 2.07
LTBP3-220ENST00000532661 EN2P19622 333 aaPredicted RBP27.99■■■□□ 2.07
LTBP3-220ENST00000532661 HMGCS2P54868 508 aa27.99■■■□□ 2.07
LTBP3-220ENST00000532661 NBPF11Q86T75 865 aa27.99■■■□□ 2.07
LTBP3-220ENST00000532661 EDC3Q96F86 508 aaKnown RBP27.99■■■□□ 2.07
LTBP3-220ENST00000532661 CDK5RAP2Q96SN8 1893 aa27.98■■■□□ 2.07
LTBP3-220ENST00000532661 GOLIM4O00461 696 aa27.98■■■□□ 2.07
LTBP3-220ENST00000532661 PRMT2P55345 433 aa27.98■■■□□ 2.07
LTBP3-220ENST00000532661 TTF1Q15361 905 aaPredicted RBP27.98■■■□□ 2.07
LTBP3-220ENST00000532661 PROCA1Q8NCQ7 364 aaPredicted RBP27.98■■■□□ 2.07
LTBP3-220ENST00000532661 TRIM34Q9BYJ4 488 aa27.98■■■□□ 2.07
LTBP3-220ENST00000532661 PTPRFP10586 1907 aa27.98■■■□□ 2.07
LTBP3-220ENST00000532661 HLA-DOAP06340 250 aa27.97■■■□□ 2.07
LTBP3-220ENST00000532661 SLC9C2Q5TAH2 1124 aa27.97■■■□□ 2.07
LTBP3-220ENST00000532661 SMCR8Q8TEV9 937 aaPredicted RBP27.97■■■□□ 2.07
LTBP3-220ENST00000532661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.97■■■□□ 2.07
LTBP3-220ENST00000532661 RIOK1Q9BRS2 568 aaKnown RBP27.97■■■□□ 2.07
LTBP3-220ENST00000532661 TBC1D2Q9BYX2 928 aa27.97■■■□□ 2.07
LTBP3-220ENST00000532661 PDE6AP16499 860 aa27.96■■■□□ 2.07
LTBP3-220ENST00000532661 FCGRTP55899 365 aa27.96■■■□□ 2.07
LTBP3-220ENST00000532661 WDR18Q9BV38 432 aa27.96■■■□□ 2.07
LTBP3-220ENST00000532661 TMEM106CQ9BVX2 250 aa27.96■■■□□ 2.07
LTBP3-220ENST00000532661 AS3MTQ9HBK9 375 aa27.96■■■□□ 2.07
LTBP3-220ENST00000532661 FOCADQ5VW36 1801 aa27.96■■■□□ 2.07
LTBP3-220ENST00000532661 MYPNQ86TC9 1320 aa27.95■■■□□ 2.07
LTBP3-220ENST00000532661 ASNSP08243 561 aa27.95■■■□□ 2.06
LTBP3-220ENST00000532661 HOXD10P28358 340 aa27.95■■■□□ 2.06
LTBP3-220ENST00000532661 SH3D19Q5HYK7 790 aa27.95■■■□□ 2.06
LTBP3-220ENST00000532661 TMED8Q6PL24 325 aaPredicted RBP27.95■■■□□ 2.06
LTBP3-220ENST00000532661 CERS3Q8IU89 383 aa27.95■■■□□ 2.06
LTBP3-220ENST00000532661 BOLA2Q9H3K6 86 aa27.95■■■□□ 2.06
LTBP3-220ENST00000532661 BRCA2P51587 3418 aa27.95■■■□□ 2.06
LTBP3-220ENST00000532661 ATAD5Q96QE3 1844 aa27.95■■■□□ 2.06
LTBP3-220ENST00000532661 ZNF532Q9HCE3 1301 aa27.94■■■□□ 2.06
LTBP3-220ENST00000532661 MAGEB6P1A0A0J9YX57 407 aa27.94■■■□□ 2.06
LTBP3-220ENST00000532661 SMARCA5O60264 1052 aaPredicted RBP27.94■■■□□ 2.06
LTBP3-220ENST00000532661 PRKCZQ05513 592 aa27.94■■■□□ 2.06
LTBP3-220ENST00000532661 MTMR2Q13614 643 aa27.94■■■□□ 2.06
LTBP3-220ENST00000532661 ANKRD13CQ8N6S4 541 aa27.94■■■□□ 2.06
LTBP3-220ENST00000532661 ZBTB21Q9ULJ3 1066 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms