RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 APOA1P02647 267 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 KRT5P13647 590 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 CTNNA1P35221 906 aaKnown RBP8.99□□□□□ -0.97
CTNND1-231ENST00000532463 BLVRAP53004 296 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 TTLL12Q14166 644 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-231ENST00000532463 HDDC2Q7Z4H3 204 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 USP48Q86UV5 1035 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 N4BP2L2Q92802 583 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-231ENST00000532463 GFM2Q969S9 779 aaKnown RBP8.99□□□□□ -0.97
CTNND1-231ENST00000532463 TRIM56Q9BRZ2 755 aaKnown RBP8.99□□□□□ -0.97
CTNND1-231ENST00000532463 HELLSQ9NRZ9 838 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 GPRASP1Q5JY77 1395 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 DAB1O75553 588 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 CCDC13Q8IYE1 715 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 ANGPTL2Q9UKU9 493 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 B4DLN1 442 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 KDM1AO60341 852 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 EFCAB14O75071 495 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 HLA-DOAP06340 250 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 CARSP49589 748 aaKnown RBP8.98□□□□□ -0.97
CTNND1-231ENST00000532463 MRPL12P52815 198 aaKnown RBP8.98□□□□□ -0.97
CTNND1-231ENST00000532463 STX1BP61266 288 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 ZC3H12BQ5HYM0 836 aaKnown RBP8.98□□□□□ -0.97
CTNND1-231ENST00000532463 CFAP70Q5T0N1 1121 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 KLHL7Q8IXQ5 586 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 PIP4K2CQ8TBX8 421 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 ALG1Q9BT22 464 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 AMOTL2Q9Y2J4 779 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 TRIM75PA6NK02 468 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 MRPL28Q13084 256 aaKnown RBP8.98□□□□□ -0.97
CTNND1-231ENST00000532463 PALM2Q8IXS6 379 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 PFDN6O15212 129 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 EPB41P11171 864 aaKnown RBP8.98□□□□□ -0.97
CTNND1-231ENST00000532463 KRT9P35527 623 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 MYL5Q02045 173 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 NBPF10Q6P3W6 841 aaKnown RBP8.98□□□□□ -0.97
CTNND1-231ENST00000532463 CNPY2Q9Y2B0 182 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 KRT75O95678 551 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 HNRNPCP07910 306 aaKnown RBP eCLIP8.98□□□□□ -0.979e-7■■■■□ 20.8
CTNND1-231ENST00000532463 ZNF530Q6P9A1 599 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-231ENST00000532463 CERS3Q8IU89 383 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 SCYL3Q8IZE3 742 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 DACH2Q96NX9 599 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 SH3GL3Q99963 347 aa8.98□□□□□ -0.97
CTNND1-231ENST00000532463 SPTLC2O15270 562 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ARHGAP6O43182 974 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 FLOT1O75955 427 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ARHGDIAP52565 204 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 STX17P56962 302 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 RNASE9P60153 205 aaKnown RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 DAB2P98082 770 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 E2F5Q15329 346 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 TRIM42Q8IWZ5 723 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 HDAC11Q96DB2 347 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 FGD4Q96M96 766 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 KRT12Q99456 494 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 TUBB6Q9BUF5 446 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 MRPS26Q9BYN8 205 aaKnown RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 SFMBT1Q9UHJ3 866 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 TRPC5Q9UL62 973 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ANKRD30BQ9BXX2 1392 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 EXOC5O00471 708 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 BAG3O95817 575 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ASIC2Q16515 512 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 PPP2R5EQ16537 467 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 DCAF17Q5H9S7 520 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 LRRC8CQ8TDW0 803 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 LARP6Q9BRS8 491 aaKnown RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 RIC8AQ9NPQ8 531 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 IRAK4Q9NWZ3 460 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 TRPC1P48995 793 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 APBA1Q02410 837 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ATP2B3Q16720 1220 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 FNBP1Q96RU3 617 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 NUP58Q9BVL2 599 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ZSCAN32Q9NX65 697 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ZNF652Q9Y2D9 606 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 GOLGA8CPA6NN73 597 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 WTAPQ15007 396 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 HP1BP3Q5SSJ5 553 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 IGSF22Q8N9C0 903 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 CCDC197Q8NCU1 140 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ZCRB1Q8TBF4 217 aaKnown RBP8.97□□□□□ -0.97
CTNND1-231ENST00000532463 CHMP6Q96FZ7 201 aa8.97□□□□□ -0.97
CTNND1-231ENST00000532463 ZBTB43O43298 467 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 MCF2P10911 925 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 CASP2P42575 452 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 BIRC3Q13489 604 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 RPS6KA1Q15418 735 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 TMTC3Q6ZXV5 915 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 POMGNT1Q8WZA1 660 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 NOC4LQ9BVI4 516 aaKnown RBP8.96□□□□□ -0.97
CTNND1-231ENST00000532463 SUCLA2Q9P2R7 463 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-231ENST00000532463 JRKLQ9Y4A0 524 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 TBC1D8BQ0IIM8 1120 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 RNF207Q6ZRF8 634 aa8.96□□□□□ -0.97
CTNND1-231ENST00000532463 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-231ENST00000532463 IFT122Q9HBG6 1241 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms