RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 HLA-DOAP06340 250 aa21.31■■□□□ 1
PPP1CA-208ENST00000532446 FGRP09769 529 aa21.31■■□□□ 1
PPP1CA-208ENST00000532446 VEGFAP15692 232 aaPredicted RBP21.31■■□□□ 1
PPP1CA-208ENST00000532446 PNMA8AQ86V59 439 aaPredicted RBP21.31■■□□□ 1
PPP1CA-208ENST00000532446 ZSCAN29Q8IWY8 852 aaPredicted RBP21.31■■□□□ 1
PPP1CA-208ENST00000532446 TM6SF1Q9BZW5 370 aa21.31■■□□□ 1
PPP1CA-208ENST00000532446 TMEM39BQ9GZU3 492 aa21.31■■□□□ 1
PPP1CA-208ENST00000532446 SCAF8Q9UPN6 1271 aaKnown RBP21.31■■□□□ 1
PPP1CA-208ENST00000532446 SLC3A2P08195 630 aaKnown RBP21.3■■□□□ 1
PPP1CA-208ENST00000532446 PCP11498 1178 aaKnown RBP21.3■■□□□ 1
PPP1CA-208ENST00000532446 GABPAQ06546 454 aa21.3■■□□□ 1
PPP1CA-208ENST00000532446 RBM46Q8TBY0 533 aaKnown RBP21.3■■□□□ 1
PPP1CA-208ENST00000532446 DYNLL2Q96FJ2 89 aa21.3■■□□□ 1
PPP1CA-208ENST00000532446 DEFB129Q9H1M3 183 aa21.3■■□□□ 1
PPP1CA-208ENST00000532446 EHD4Q9H223 541 aa21.3■■□□□ 1
PPP1CA-208ENST00000532446 RNF41Q9H4P4 317 aaPredicted RBP21.3■■□□□ 1
PPP1CA-208ENST00000532446 INCENPQ9NQS7 918 aa21.3■■□□□ 1
PPP1CA-208ENST00000532446 PI4KBQ9UBF8 816 aa21.3■■□□□ 1
PPP1CA-208ENST00000532446 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.3■■□□□ 1
PPP1CA-208ENST00000532446 MYH8P13535 1937 aa21.29■■□□□ 1
PPP1CA-208ENST00000532446 MFSD6Q6ZSS7 791 aa21.29■■□□□ 1
PPP1CA-208ENST00000532446 C16orf86Q6ZW13 317 aa21.29■■□□□ 1
PPP1CA-208ENST00000532446 METTL16Q86W50 562 aaKnown RBP21.29■■□□□ 1
PPP1CA-208ENST00000532446 STK11IPQ8N1F8 1099 aa21.29■■□□□ 1
PPP1CA-208ENST00000532446 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
PPP1CA-208ENST00000532446 TEPSINQ96N21 525 aa21.29■■□□□ 1
PPP1CA-208ENST00000532446 SERPINB13Q9UIV8 391 aa21.29■■□□□ 1
PPP1CA-208ENST00000532446 NEDD4P46934 1319 aa21.29■■□□□ 1
PPP1CA-208ENST00000532446 PSMA5P28066 241 aa21.28■■□□□ 1
PPP1CA-208ENST00000532446 DCPSQ96C86 337 aaKnown RBP21.28■■□□□ 1
PPP1CA-208ENST00000532446 NEK1Q96PY6 1258 aa21.28■■□□□ 1
PPP1CA-208ENST00000532446 CSRNP1Q96S65 589 aa21.28■■□□□ 1
PPP1CA-208ENST00000532446 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
PPP1CA-208ENST00000532446 ORC4O43929 436 aa21.27■■□□□ 1
PPP1CA-208ENST00000532446 PDE4BQ07343 736 aa21.27■■□□□ 1
PPP1CA-208ENST00000532446 COL9A3Q14050 684 aaPredicted RBP21.27■■□□□ 1
PPP1CA-208ENST00000532446 EAPPQ56P03 285 aaPredicted RBP21.27■■□□□ 1
PPP1CA-208ENST00000532446 FOXP4Q8IVH2 680 aaPredicted RBP21.27■■□□□ 1
PPP1CA-208ENST00000532446 CDAN1Q8IWY9 1227 aa21.27■■□□□ 1
PPP1CA-208ENST00000532446 NCOA7Q8NI08 942 aa21.27■■□□□ 1
PPP1CA-208ENST00000532446 CNNM2Q9H8M5 875 aa21.27■■□□□ 1
PPP1CA-208ENST00000532446 ZSWIM6Q9HCJ5 1215 aa21.27■■□□□ 1
PPP1CA-208ENST00000532446 PPP2R3BQ9Y5P8 575 aa21.27■■□□□ 1
PPP1CA-208ENST00000532446 CASTP20810 708 aaKnown RBP21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 CDK8P49336 464 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 TRDNQ13061 729 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 KRT23Q9C075 422 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 HMGB1P09429 215 aaKnown RBP21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 RABEP1Q15276 862 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 RALYLQ86SE5 291 aaKnown RBP21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 MB21D2Q8IYB1 491 aaPredicted RBP21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 SLC44A5Q8NCS7 719 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 NKX2-3Q8TAU0 364 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 DNAJC18Q9H819 358 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 SWAP70Q9UH65 585 aa21.26■□□□□ 0.99
PPP1CA-208ENST00000532446 B4E1Z4 1266 aa21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 PRDM1O75626 825 aa21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 BLOC1S2Q6QNY1 142 aa21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 RUFY3Q7L099 469 aa21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 SULF1Q8IWU6 871 aa21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 CRACR2BQ8N4Y2 399 aaPredicted RBP21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 UPF3BQ9BZI7 483 aaKnown RBP21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 MKNK2Q9HBH9 465 aa21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 ZNF287Q9HBT7 754 aa21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 HERC5Q9UII4 1024 aaKnown RBP21.25■□□□□ 0.99
PPP1CA-208ENST00000532446 TBC1D12O60347 775 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 POTEIP0CG38 1075 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 POTEJP0CG39 1038 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 SLURP2P0DP57 97 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 CPA1P15085 419 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 MAP3K10Q02779 954 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 FSTL1Q12841 308 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 RRP12Q5JTH9 1297 aaKnown RBP21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 KRT26Q7Z3Y9 468 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 TOMM22Q9NS69 142 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 CYP46A1Q9Y6A2 500 aa21.24■□□□□ 0.99
PPP1CA-208ENST00000532446 RASA1P20936 1047 aa21.23■□□□□ 0.99
PPP1CA-208ENST00000532446 RPS6KB1P23443 525 aa21.23■□□□□ 0.99
PPP1CA-208ENST00000532446 SHMT1P34896 483 aa21.23■□□□□ 0.99
PPP1CA-208ENST00000532446 NT5C2P49902 561 aa21.23■□□□□ 0.99
PPP1CA-208ENST00000532446 DHX32Q7L7V1 743 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-208ENST00000532446 ESR2Q92731 530 aa21.23■□□□□ 0.99
PPP1CA-208ENST00000532446 ZSWIM5Q9P217 1185 aa21.23■□□□□ 0.99
PPP1CA-208ENST00000532446 CEP350Q5VT06 3117 aa21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 FAM196BA6NMK8 535 aa21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 ADM5C9JUS6 153 aa21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 KDM4AO75164 1064 aa21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 NEK4P51957 841 aa21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 EXOSC10Q01780 885 aaKnown RBP21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 NBPF12Q5TAG4 269 aaPredicted RBP21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 CYB5R4Q7L1T6 521 aa21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 TRIM34Q9BYJ4 488 aa21.22■□□□□ 0.99
PPP1CA-208ENST00000532446 RANBP6O60518 1105 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-208ENST00000532446 MCM5P33992 734 aa21.21■□□□□ 0.99
PPP1CA-208ENST00000532446 APLP1P51693 650 aa21.21■□□□□ 0.99
PPP1CA-208ENST00000532446 ANTXR2P58335 489 aa21.21■□□□□ 0.99
PPP1CA-208ENST00000532446 PRAMEF18Q5VWM3 479 aa21.21■□□□□ 0.99
PPP1CA-208ENST00000532446 TATDN1Q6P1N9 297 aa21.21■□□□□ 0.99
PPP1CA-208ENST00000532446 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
PPP1CA-208ENST00000532446 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms