RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 SPTY2D1Q68D10 685 aaPredicted RBP17.67■□□□□ 0.42
SRPRA-206ENST00000532259 CCAR1Q8IX12 1150 aaKnown RBP17.67■□□□□ 0.42
SRPRA-206ENST00000532259 ZSCAN10Q96SZ4 725 aaPredicted RBP17.67■□□□□ 0.42
SRPRA-206ENST00000532259 RCOR1Q9UKL0 485 aa17.67■□□□□ 0.42
SRPRA-206ENST00000532259 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
SRPRA-206ENST00000532259 USP5P45974 858 aa17.67■□□□□ 0.42
SRPRA-206ENST00000532259 SSRP1Q08945 709 aaKnown RBP17.67■□□□□ 0.42
SRPRA-206ENST00000532259 TGFBRAP1Q8WUH2 860 aa17.67■□□□□ 0.42
SRPRA-206ENST00000532259 MXD3Q9BW11 206 aa17.67■□□□□ 0.42
SRPRA-206ENST00000532259 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
SRPRA-206ENST00000532259 LETM1O95202 739 aaPredicted RBP17.66■□□□□ 0.42
SRPRA-206ENST00000532259 IL1R1P14778 569 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 MAP3K11Q16584 847 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 MFSD14BQ5SR56 506 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 C15orf52Q6ZUT6 534 aaKnown RBP17.66■□□□□ 0.42
SRPRA-206ENST00000532259 FANCBQ8NB91 859 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 ERCC4Q92889 916 aaPredicted RBP17.66■□□□□ 0.42
SRPRA-206ENST00000532259 FUCA2Q9BTY2 467 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 ATP8A2Q9NTI2 1148 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 PODXL2Q9NZ53 605 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
SRPRA-206ENST00000532259 SAP30BPQ9UHR5 308 aaKnown RBP17.66■□□□□ 0.42
SRPRA-206ENST00000532259 KCNJ14Q9UNX9 436 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
SRPRA-206ENST00000532259 STK38Q15208 465 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 SF3A1Q15459 793 aaKnown RBP17.66■□□□□ 0.42
SRPRA-206ENST00000532259 MYSM1Q5VVJ2 828 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 PPP1R9BQ96SB3 815 aa17.66■□□□□ 0.42
SRPRA-206ENST00000532259 A0A087WWV3 80 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 FGRP09769 529 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 IFIT1BQ5T764 474 aaKnown RBP17.65■□□□□ 0.42
SRPRA-206ENST00000532259 NBPF11Q86T75 865 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 MAPKAPK5Q8IW41 473 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 SLC44A5Q8NCS7 719 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 USP25Q9UHP3 1055 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 ECM29Q5VYK3 1845 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 GTF2IP78347 998 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 TRIM29Q14134 588 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 DOK7Q18PE1 504 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 PIBF1Q8WXW3 757 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 RTFDC1Q9BY42 306 aaPredicted RBP17.65■□□□□ 0.42
SRPRA-206ENST00000532259 PCDHA7Q9UN72 937 aa17.65■□□□□ 0.42
SRPRA-206ENST00000532259 F8W031 263 aaPredicted RBP17.64■□□□□ 0.42
SRPRA-206ENST00000532259 FMNL1O95466 1100 aaPredicted RBP17.64■□□□□ 0.42
SRPRA-206ENST00000532259 IFNAR1P17181 557 aa17.64■□□□□ 0.42
SRPRA-206ENST00000532259 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.42
SRPRA-206ENST00000532259 PLCD1P51178 756 aa17.64■□□□□ 0.42
SRPRA-206ENST00000532259 EN1Q05925 392 aaPredicted RBP17.64■□□□□ 0.42
SRPRA-206ENST00000532259 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.42
SRPRA-206ENST00000532259 SP8Q8IXZ3 490 aa17.64■□□□□ 0.42
SRPRA-206ENST00000532259 ZNF219Q9P2Y4 722 aaPredicted RBP17.64■□□□□ 0.42
SRPRA-206ENST00000532259 MTMR7Q9Y216 660 aa17.64■□□□□ 0.42
SRPRA-206ENST00000532259 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.42
SRPRA-206ENST00000532259 A0A1B0GVL5 298 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 PLEKHA8P1O95397 391 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 BTDP43251 543 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 IQCA1Q86XH1 822 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 FSIP1Q8NA03 581 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 SHISA4Q96DD7 197 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 PDGFDQ9GZP0 370 aaPredicted RBP17.64■□□□□ 0.41
SRPRA-206ENST00000532259 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 MAST2Q6P0Q8 1798 aa17.64■□□□□ 0.41
SRPRA-206ENST00000532259 FAM43AQ8N2R8 423 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 CRACR2BQ8N4Y2 399 aaPredicted RBP17.63■□□□□ 0.41
SRPRA-206ENST00000532259 LINC00301Q8NCQ3 95 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 ZNF622Q969S3 477 aaKnown RBP eCLIP17.63■□□□□ 0.411e-7■□□□□ 8.8
SRPRA-206ENST00000532259 CLSTN2Q9H4D0 955 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 ARPP21Q9UBL0 812 aaPredicted RBP17.63■□□□□ 0.41
SRPRA-206ENST00000532259 MROH7-TTC4A0A0A0MT08 1334 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 CCDC192P0DO97 292 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 C12orf60Q5U649 245 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
SRPRA-206ENST00000532259 RTEL1Q9NZ71 1219 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 KIAA1551Q9HCM1 1747 aa17.63■□□□□ 0.41
SRPRA-206ENST00000532259 TSPY2A6NKD2 308 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 TYRO3Q06418 890 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 TRIM22Q8IYM9 498 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 TMTC2Q8N394 836 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 KCNQ5Q9NR82 932 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 BTBD18B2RXH4 712 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 TROAPQ12815 778 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 SBK1Q52WX2 424 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 BRAPQ7Z569 592 aa17.62■□□□□ 0.41
SRPRA-206ENST00000532259 LTBP1Q14766 1721 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 SPTLC2O15270 562 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 ORC4O43929 436 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 NPR1P16066 1061 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 ATP2B1P20020 1258 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 SNW1Q13573 536 aaKnown RBP17.61■□□□□ 0.41
SRPRA-206ENST00000532259 CATIPQ7Z7H3 387 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 CERS5Q8N5B7 392 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 COL11A2P13942 1736 aaPredicted RBP17.61■□□□□ 0.41
SRPRA-206ENST00000532259 BAG3O95817 575 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 CHRNA5P30532 468 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 ANO1Q5XXA6 986 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 NOL10Q9BSC4 688 aaKnown RBP17.61■□□□□ 0.41
SRPRA-206ENST00000532259 IL17RBQ9NRM6 502 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 MRVI1Q9Y6F6 885 aa17.61■□□□□ 0.41
SRPRA-206ENST00000532259 NID2Q14112 1375 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms