RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
AMBRA1-210ENST00000531542 SLURP2P0DP57 97 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 MS4A1P11836 297 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 SLC4A8Q2Y0W8 1093 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 CEP85Q6P2H3 762 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 FOXP4Q8IVH2 680 aaPredicted RBP16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 ZNF280CQ8ND82 737 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 SNRKQ9NRH2 765 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 GINM1Q9NU53 330 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 BRCA2P51587 3418 aa16.32■□□□□ 0.2
AMBRA1-210ENST00000531542 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 CAPN2P17655 700 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 GRK4P32298 578 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 SH3D19Q5HYK7 790 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 RAET1EQ8TD07 263 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 EAF2Q96CJ1 260 aaPredicted RBP16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 C1orf115Q9H7X2 142 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 PNMA3Q9UL41 463 aa16.31■□□□□ 0.2
AMBRA1-210ENST00000531542 MYPNQ86TC9 1320 aa16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 ZAP70P43403 619 aa16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 SPP2Q13103 211 aa16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 WDR18Q9BV38 432 aa16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
AMBRA1-210ENST00000531542 DOCK1Q14185 1865 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 GCLCP48506 637 aaPredicted RBP16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 IRF5Q13568 498 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 SLAIN1Q8ND83 568 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 PXYLP1Q8TE99 480 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 TGFBRAP1Q8WUH2 860 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
AMBRA1-210ENST00000531542 FLT1P17948 1338 aa16.28■□□□□ 0.2
AMBRA1-210ENST00000531542 GJB1P08034 283 aa16.28■□□□□ 0.2
AMBRA1-210ENST00000531542 ASNSP08243 561 aa16.28■□□□□ 0.2
AMBRA1-210ENST00000531542 PRKCZQ05513 592 aa16.28■□□□□ 0.2
AMBRA1-210ENST00000531542 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
AMBRA1-210ENST00000531542 FAM110CQ1W6H9 321 aa16.28■□□□□ 0.2
AMBRA1-210ENST00000531542 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
AMBRA1-210ENST00000531542 PHIPQ8WWQ0 1821 aa16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 GJA8P48165 433 aa16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 UBXN2AP68543 259 aa16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 CCDC8Q9H0W5 538 aaPredicted RBP16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 DNAJC18Q9H819 358 aa16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 TLR7Q9NYK1 1049 aaKnown RBP16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
AMBRA1-210ENST00000531542 C19orf81C9J6K1 198 aa16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 FLT3LGP49771 235 aa16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 BACE1P56817 501 aa16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 MTFR1Q15390 333 aa16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 CCDC84Q86UT8 332 aaPredicted RBP16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 MAPKAPK5Q8IW41 473 aa16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 RPAP2Q8IXW5 612 aaPredicted RBP16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
AMBRA1-210ENST00000531542 CCL5P13501 91 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 CYP7A1P22680 504 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 HMGCS2P54868 508 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 MAP3K12Q12852 859 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 UBE2Q1Q7Z7E8 422 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 ANKRD13CQ8N6S4 541 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 PANK1Q8TE04 598 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 EHD4Q9H223 541 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 PTPRFP10586 1907 aa16.25■□□□□ 0.19
AMBRA1-210ENST00000531542 ADCY3O60266 1144 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 IDH1O75874 414 aaKnown RBP16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 HLA-DOAP06340 250 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 TATDN1Q6P1N9 297 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 RHPN1Q8TCX5 695 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 COA7Q96BR5 231 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 ASCC2Q9H1I8 757 aaPredicted RBP16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 CHMP4BQ9H444 224 aaKnown RBP16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 ZBTB40Q9NUA8 1239 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 MORF4L1Q9UBU8 362 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 DDX19BQ9UMR2 479 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
AMBRA1-210ENST00000531542 HMMRO75330 724 aa16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 MYCP01106 439 aaPredicted RBP16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 JAG1P78504 1218 aa16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 AACSQ86V21 672 aa16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms