RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 NECAB3Q96P71 396 aaPredicted RBP9.21□□□□□ -0.94
PTPRK-220ENST00000531466 FAM53CQ9NYF3 392 aa9.21□□□□□ -0.94
PTPRK-220ENST00000531466 PAGE1O75459 146 aa9.2□□□□□ -0.94
PTPRK-220ENST00000531466 PITPNM2Q9BZ72 1349 aa9.2□□□□□ -0.94
PTPRK-220ENST00000531466 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-220ENST00000531466 FBXO24O75426 580 aa9.19□□□□□ -0.94
PTPRK-220ENST00000531466 EOMESO95936 686 aa9.19□□□□□ -0.94
PTPRK-220ENST00000531466 BMP6P22004 513 aa9.19□□□□□ -0.94
PTPRK-220ENST00000531466 ZBTB37Q5TC79 503 aa9.19□□□□□ -0.94
PTPRK-220ENST00000531466 CDC37L1Q7L3B6 337 aa9.19□□□□□ -0.94
PTPRK-220ENST00000531466 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-220ENST00000531466 PRDM5Q9NQX1 630 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-220ENST00000531466 SOWAHDA6NJG2 315 aa9.18□□□□□ -0.94
PTPRK-220ENST00000531466 ENC1O14682 589 aa9.18□□□□□ -0.94
PTPRK-220ENST00000531466 TRIM37O94972 964 aa9.18□□□□□ -0.94
PTPRK-220ENST00000531466 CLCN7P51798 805 aa9.18□□□□□ -0.94
PTPRK-220ENST00000531466 ARMCX6Q7L4S7 300 aa9.18□□□□□ -0.94
PTPRK-220ENST00000531466 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
PTPRK-220ENST00000531466 BIN2Q9UBW5 565 aaPredicted RBP9.18□□□□□ -0.94
PTPRK-220ENST00000531466 PCDHA4Q9UN74 947 aa9.18□□□□□ -0.94
PTPRK-220ENST00000531466 FANCGO15287 622 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 AFMP43652 599 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 RAP1GAPP47736 663 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 RING1Q06587 406 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 ENOX2Q16206 610 aaKnown RBP9.17□□□□□ -0.94
PTPRK-220ENST00000531466 RASIP1Q5U651 963 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 CILP2Q8IUL8 1156 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 BHLHE22Q8NFJ8 381 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-220ENST00000531466 FOXQ1Q9C009 403 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 SAMM50Q9Y512 469 aa9.17□□□□□ -0.94
PTPRK-220ENST00000531466 DSC3Q14574 896 aa9.16□□□□□ -0.94
PTPRK-220ENST00000531466 LLGL2Q6P1M3 1020 aa9.16□□□□□ -0.94
PTPRK-220ENST00000531466 ATP13A1Q9HD20 1204 aa9.16□□□□□ -0.94
PTPRK-220ENST00000531466 DCTN4Q9UJW0 460 aa9.16□□□□□ -0.94
PTPRK-220ENST00000531466 GSTT1P30711 240 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 PLCB3Q01970 1234 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 MPZL3Q6UWV2 235 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 PRR23BQ6ZRT6 265 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 ELMO3Q96BJ8 720 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 KIRREL1Q96J84 757 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 HSPA12BQ96MM6 686 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 CEP44Q9C0F1 390 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 LMCD1Q9NZU5 365 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 MAPK8IP1Q9UQF2 711 aa9.15□□□□□ -0.94
PTPRK-220ENST00000531466 PRR33A8MZF0 331 aa9.14□□□□□ -0.95
PTPRK-220ENST00000531466 FAM155AB1AL88 458 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-220ENST00000531466 CFPP27918 469 aa9.14□□□□□ -0.95
PTPRK-220ENST00000531466 CDKAL1Q5VV42 579 aa9.14□□□□□ -0.95
PTPRK-220ENST00000531466 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
PTPRK-220ENST00000531466 TOX2Q96NM4 488 aa9.14□□□□□ -0.95
PTPRK-220ENST00000531466 CNTNAP4Q9C0A0 1308 aa9.13□□□□□ -0.95
PTPRK-220ENST00000531466 TREHO43280 583 aa9.13□□□□□ -0.95
PTPRK-220ENST00000531466 SLITRK5O94991 958 aa9.13□□□□□ -0.95
PTPRK-220ENST00000531466 GLI1P08151 1106 aa9.13□□□□□ -0.95
PTPRK-220ENST00000531466 SYDE1Q6ZW31 735 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-220ENST00000531466 KCT2Q8NC54 265 aa9.13□□□□□ -0.95
PTPRK-220ENST00000531466 ZNF507Q8TCN5 953 aa9.13□□□□□ -0.95
PTPRK-220ENST00000531466 SEMA3GQ9NS98 782 aa9.13□□□□□ -0.95
PTPRK-220ENST00000531466 PRAMEF27A3QJZ7 478 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 LRIG2O94898 1065 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 TSPAN15O95858 294 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 MAPK1P28482 360 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 LRRC14Q15048 493 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 KRTAP19-4Q3LI73 84 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 PPP1R16BQ96T49 567 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 KRTAP4-2Q9BYR5 136 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 C19orf73Q9NVV2 129 aa9.12□□□□□ -0.95
PTPRK-220ENST00000531466 TPX2Q9ULW0 747 aaKnown RBP9.12□□□□□ -0.95
PTPRK-220ENST00000531466 FGD1P98174 961 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 INPP5AQ14642 412 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 TMEM67Q5HYA8 995 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 LRFN4Q6PJG9 635 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 MFSD4AQ8N468 514 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 SETDB2Q96T68 719 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 MIPEPQ99797 713 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 OSBPL7Q9BZF2 842 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 PPM1HQ9ULR3 514 aa9.11□□□□□ -0.95
PTPRK-220ENST00000531466 H3BS24 57 aa9.1□□□□□ -0.95
PTPRK-220ENST00000531466 CELA3AP09093 270 aa9.1□□□□□ -0.95
PTPRK-220ENST00000531466 SFRP5Q5T4F7 317 aa9.1□□□□□ -0.95
PTPRK-220ENST00000531466 C14orf37Q86TY3 774 aa9.1□□□□□ -0.95
PTPRK-220ENST00000531466 C1QL4Q86Z23 238 aa9.1□□□□□ -0.95
PTPRK-220ENST00000531466 LRRC56Q8IYG6 542 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-220ENST00000531466 ARID3AQ99856 593 aa9.1□□□□□ -0.95
PTPRK-220ENST00000531466 KRTAP9-7A8MTY7 169 aa9.09□□□□□ -0.95
PTPRK-220ENST00000531466 RBAK-RBAKDNI3L0D1 243 aa9.09□□□□□ -0.95
PTPRK-220ENST00000531466 PTPN11Q06124 597 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-220ENST00000531466 SLBPQ14493 270 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTPRK-220ENST00000531466 PCNX4Q63HM2 1172 aa9.09□□□□□ -0.95
PTPRK-220ENST00000531466 LCNL1Q6ZST4 164 aa9.09□□□□□ -0.95
PTPRK-220ENST00000531466 ZNF865P0CJ78 1059 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-220ENST00000531466 GDNFP39905 211 aa9.08□□□□□ -0.96
PTPRK-220ENST00000531466 MAPK8P45983 427 aa9.08□□□□□ -0.96
PTPRK-220ENST00000531466 NKG7Q16617 165 aa9.08□□□□□ -0.96
PTPRK-220ENST00000531466 ANKLE2Q86XL3 938 aa9.08□□□□□ -0.96
PTPRK-220ENST00000531466 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
PTPRK-220ENST00000531466 ZSCAN18Q8TBC5 510 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-220ENST00000531466 PLPPR2Q96GM1 343 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms