RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 G3BP1Q13283 466 aaKnown RBP eCLIP22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 SLAIN1Q8ND83 568 aa22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 OSBPL5Q9H0X9 879 aaPredicted RBP22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 UNC93B1Q9H1C4 597 aa22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 AGTPBP1Q9UPW5 1226 aa22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 COL2A1P02458 1487 aaPredicted RBP22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 ALPK3Q96L96 1907 aa22.7■■□□□ 1.23
SSSCA1-206ENST00000531405 ADCY3O60266 1144 aa22.7■■□□□ 1.22
SSSCA1-206ENST00000531405 NPM3O75607 178 aaKnown RBP22.7■■□□□ 1.22
SSSCA1-206ENST00000531405 FLT3LGP49771 235 aa22.7■■□□□ 1.22
SSSCA1-206ENST00000531405 UBXN2AP68543 259 aa22.7■■□□□ 1.22
SSSCA1-206ENST00000531405 ANKRD13CQ8N6S4 541 aa22.7■■□□□ 1.22
SSSCA1-206ENST00000531405 NKX2-3Q8TAU0 364 aa22.7■■□□□ 1.22
SSSCA1-206ENST00000531405 DPF3Q92784 378 aa22.7■■□□□ 1.22
SSSCA1-206ENST00000531405 MYH1P12882 1939 aa22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 PLXNB2O15031 1838 aa22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 TNPO2O14787 897 aaKnown RBP22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 RRP1BQ14684 758 aaKnown RBP22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 TEX11Q8IYF3 940 aa22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 SH3RF3Q8TEJ3 882 aaPredicted RBP22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 SNRKQ9NRH2 765 aa22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 LRP2BPQ9P2M1 347 aa22.69■■□□□ 1.22
SSSCA1-206ENST00000531405 SPP2Q13103 211 aa22.68■■□□□ 1.22
SSSCA1-206ENST00000531405 UBE2Q1Q7Z7E8 422 aa22.68■■□□□ 1.22
SSSCA1-206ENST00000531405 TMEM57Q8N5G2 664 aa22.68■■□□□ 1.22
SSSCA1-206ENST00000531405 MAP4K4O95819 1239 aaPredicted RBP22.67■■□□□ 1.22
SSSCA1-206ENST00000531405 INHAP05111 366 aa22.67■■□□□ 1.22
SSSCA1-206ENST00000531405 UQCRFS1P1P0C7P4 283 aa22.67■■□□□ 1.22
SSSCA1-206ENST00000531405 U2AF1L4Q8WU68 220 aaKnown RBP22.67■■□□□ 1.22
SSSCA1-206ENST00000531405 TAOK2Q9UL54 1235 aa22.67■■□□□ 1.22
SSSCA1-206ENST00000531405 HMGCS2P54868 508 aa22.66■■□□□ 1.22
SSSCA1-206ENST00000531405 CHRDL2Q6WN34 429 aa22.66■■□□□ 1.22
SSSCA1-206ENST00000531405 PROCA1Q8NCQ7 364 aaPredicted RBP22.66■■□□□ 1.22
SSSCA1-206ENST00000531405 ZNF280CQ8ND82 737 aa22.66■■□□□ 1.22
SSSCA1-206ENST00000531405 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
SSSCA1-206ENST00000531405 CAP2P40123 477 aa22.65■■□□□ 1.22
SSSCA1-206ENST00000531405 TTC39AQ5SRH9 613 aa22.65■■□□□ 1.22
SSSCA1-206ENST00000531405 DBNDD2Q9BQY9 259 aa22.65■■□□□ 1.22
SSSCA1-206ENST00000531405 PNMA3Q9UL41 463 aa22.65■■□□□ 1.22
SSSCA1-206ENST00000531405 FARP2O94887 1054 aaPredicted RBP22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 IRF5Q13568 498 aa22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 POLA2Q14181 598 aa22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 TNNI3KQ59H18 835 aa22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 NAA16Q6N069 864 aaPredicted RBP22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 ADGRA1Q86SQ6 560 aa22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 NOL10Q9BSC4 688 aaKnown RBP22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 C1orf115Q9H7X2 142 aa22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 FPGT-TNNI3KV9GXZ4 949 aa22.64■■□□□ 1.21
SSSCA1-206ENST00000531405 USP17L5A8MUK1 530 aa22.63■■□□□ 1.21
SSSCA1-206ENST00000531405 SGPL1O95470 568 aa22.63■■□□□ 1.21
SSSCA1-206ENST00000531405 OS9Q13438 667 aaPredicted RBP22.63■■□□□ 1.21
SSSCA1-206ENST00000531405 FAM110CQ1W6H9 321 aa22.63■■□□□ 1.21
SSSCA1-206ENST00000531405 ZKSCAN2Q63HK3 967 aa22.63■■□□□ 1.21
SSSCA1-206ENST00000531405 PXYLP1Q8TE99 480 aa22.63■■□□□ 1.21
SSSCA1-206ENST00000531405 COA7Q96BR5 231 aa22.63■■□□□ 1.21
SSSCA1-206ENST00000531405 MAPKAPK5Q8IW41 473 aa22.62■■□□□ 1.21
SSSCA1-206ENST00000531405 TGFBRAP1Q8WUH2 860 aa22.62■■□□□ 1.21
SSSCA1-206ENST00000531405 DEFB118Q96PH6 123 aa22.62■■□□□ 1.21
SSSCA1-206ENST00000531405 HTATIP2Q9BUP3 242 aa22.62■■□□□ 1.21
SSSCA1-206ENST00000531405 GPR108Q9NPR9 543 aa22.62■■□□□ 1.21
SSSCA1-206ENST00000531405 PI4KBQ9UBF8 816 aa22.62■■□□□ 1.21
SSSCA1-206ENST00000531405 HERC5Q9UII4 1024 aaKnown RBP22.62■■□□□ 1.21
SSSCA1-206ENST00000531405 CYP2E1P05181 493 aaPredicted RBP22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 JAG1P78504 1218 aa22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 SHROOM1Q2M3G4 852 aaPredicted RBP22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 CCDC158Q5M9N0 1113 aa22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 SSH3Q8TE77 659 aa22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 TBC1D2Q9BYX2 928 aa22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 ASCC2Q9H1I8 757 aaPredicted RBP22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 RBM27Q9P2N5 1060 aaKnown RBP22.61■■□□□ 1.21
SSSCA1-206ENST00000531405 FLT1P17948 1338 aa22.6■■□□□ 1.21
SSSCA1-206ENST00000531405 SURF6O75683 361 aaKnown RBP22.6■■□□□ 1.21
SSSCA1-206ENST00000531405 BAG3O95817 575 aa22.6■■□□□ 1.21
SSSCA1-206ENST00000531405 TFRCP02786 760 aaKnown RBP22.6■■□□□ 1.21
SSSCA1-206ENST00000531405 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
SSSCA1-206ENST00000531405 MTMR2Q13614 643 aa22.6■■□□□ 1.21
SSSCA1-206ENST00000531405 DNAJC18Q9H819 358 aa22.6■■□□□ 1.21
SSSCA1-206ENST00000531405 ZAP70P43403 619 aa22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 GCLCP48506 637 aaPredicted RBP22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 PPP4CP60510 307 aa22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 PABPC4Q13310 644 aaKnown RBP eCLIP22.59■■□□□ 1.214e-8■■■■□ 20.3
SSSCA1-206ENST00000531405 SH3D19Q5HYK7 790 aa22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 DHX36Q9H2U1 1008 aaKnown RBP22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 AS3MTQ9HBK9 375 aa22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 PIH1D3Q9NQM4 214 aaKnown RBP22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 PAK6Q9NQU5 681 aaPredicted RBP22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 TLR7Q9NYK1 1049 aaKnown RBP22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 PALD1Q9ULE6 856 aa22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 DDX60LQ5H9U9 1706 aaKnown RBP22.59■■□□□ 1.21
SSSCA1-206ENST00000531405 PEX10O60683 326 aa22.58■■□□□ 1.21
SSSCA1-206ENST00000531405 GDF11O95390 407 aa22.58■■□□□ 1.21
SSSCA1-206ENST00000531405 PLCG2P16885 1265 aa22.58■■□□□ 1.21
SSSCA1-206ENST00000531405 SAP30BPQ9UHR5 308 aaKnown RBP22.58■■□□□ 1.21
SSSCA1-206ENST00000531405 DYNLL1P63167 89 aaKnown RBP22.57■■□□□ 1.2
SSSCA1-206ENST00000531405 CRACR2BQ8N4Y2 399 aaPredicted RBP22.57■■□□□ 1.2
SSSCA1-206ENST00000531405 WDR18Q9BV38 432 aa22.57■■□□□ 1.2
SSSCA1-206ENST00000531405 DBNLQ9UJU6 430 aaKnown RBP22.57■■□□□ 1.2
SSSCA1-206ENST00000531405 LAMA3Q16787 3333 aa22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 ZBTB7BO15156 539 aaPredicted RBP22.56■■□□□ 1.2
SSSCA1-206ENST00000531405 ASNSP08243 561 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms