RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 DOCK3Q8IZD9 2030 aa20.36■□□□□ 0.85
GSDMD-210ENST00000531173 CYP2C8P10632 490 aa20.36■□□□□ 0.85
GSDMD-210ENST00000531173 FASTKD5Q7L8L6 764 aaKnown RBP20.36■□□□□ 0.85
GSDMD-210ENST00000531173 CCDC84Q86UT8 332 aaPredicted RBP20.36■□□□□ 0.85
GSDMD-210ENST00000531173 METTL16Q86W50 562 aaKnown RBP20.36■□□□□ 0.85
GSDMD-210ENST00000531173 SIRT2Q8IXJ6 389 aa20.36■□□□□ 0.85
GSDMD-210ENST00000531173 PARK7Q99497 189 aaKnown RBP20.36■□□□□ 0.85
GSDMD-210ENST00000531173 AATFQ9NY61 560 aaKnown RBP eCLIP20.36■□□□□ 0.85
GSDMD-210ENST00000531173 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
GSDMD-210ENST00000531173 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.35■□□□□ 0.85
GSDMD-210ENST00000531173 ZBTB40Q9NUA8 1239 aa20.35■□□□□ 0.85
GSDMD-210ENST00000531173 SLC9C1Q4G0N8 1177 aa20.34■□□□□ 0.85
GSDMD-210ENST00000531173 DNAJC18Q9H819 358 aa20.34■□□□□ 0.85
GSDMD-210ENST00000531173 HERC5Q9UII4 1024 aaKnown RBP20.34■□□□□ 0.85
GSDMD-210ENST00000531173 FLT1P17948 1338 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 TRIM75PA6NK02 468 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 BAG3O95817 575 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 PLCG2P16885 1265 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 CAP2P40123 477 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 PSMC4P43686 418 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 PRMT2P55345 433 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 KIF22Q14807 665 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 ERC1Q8IUD2 1116 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 DHX36Q9H2U1 1008 aaKnown RBP20.33■□□□□ 0.85
GSDMD-210ENST00000531173 PI4KBQ9UBF8 816 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 SRRDQ9UH36 339 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 NDUFB9Q9Y6M9 179 aa20.33■□□□□ 0.85
GSDMD-210ENST00000531173 MYH1P12882 1939 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 MS4A1P11836 297 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 OSBPP22059 807 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 JAG1P78504 1218 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 PRPF38BQ5VTL8 546 aaKnown RBP20.32■□□□□ 0.84
GSDMD-210ENST00000531173 AACSQ86V21 672 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 TGFBRAP1Q8WUH2 860 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 AGTPBP1Q9UPW5 1226 aa20.32■□□□□ 0.84
GSDMD-210ENST00000531173 EN2P19622 333 aaPredicted RBP20.31■□□□□ 0.84
GSDMD-210ENST00000531173 TREML2Q5T2D2 321 aa20.31■□□□□ 0.84
GSDMD-210ENST00000531173 GADL1Q6ZQY3 521 aa20.31■□□□□ 0.84
GSDMD-210ENST00000531173 MAPKAPK5Q8IW41 473 aa20.31■□□□□ 0.84
GSDMD-210ENST00000531173 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
GSDMD-210ENST00000531173 SH3TC2Q8TF17 1288 aa20.31■□□□□ 0.84
GSDMD-210ENST00000531173 NOL10Q9BSC4 688 aaKnown RBP20.31■□□□□ 0.84
GSDMD-210ENST00000531173 COG6Q9Y2V7 657 aa20.31■□□□□ 0.84
GSDMD-210ENST00000531173 DYNLL1P63167 89 aaKnown RBP20.3■□□□□ 0.84
GSDMD-210ENST00000531173 SPP2Q13103 211 aa20.3■□□□□ 0.84
GSDMD-210ENST00000531173 NBPF11Q86T75 865 aa20.3■□□□□ 0.84
GSDMD-210ENST00000531173 RPAP2Q8IXW5 612 aaPredicted RBP20.3■□□□□ 0.84
GSDMD-210ENST00000531173 ZNF280CQ8ND82 737 aa20.3■□□□□ 0.84
GSDMD-210ENST00000531173 PALD1Q9ULE6 856 aa20.3■□□□□ 0.84
GSDMD-210ENST00000531173 DDX19BQ9UMR2 479 aa20.3■□□□□ 0.84
GSDMD-210ENST00000531173 DDX60LQ5H9U9 1706 aaKnown RBP20.3■□□□□ 0.84
GSDMD-210ENST00000531173 IDH1O75874 414 aaKnown RBP20.29■□□□□ 0.84
GSDMD-210ENST00000531173 SLC34A2O95436 690 aa20.29■□□□□ 0.84
GSDMD-210ENST00000531173 CYP7A1P22680 504 aa20.29■□□□□ 0.84
GSDMD-210ENST00000531173 TMED8Q6PL24 325 aaPredicted RBP20.29■□□□□ 0.84
GSDMD-210ENST00000531173 PROCA1Q8NCQ7 364 aaPredicted RBP20.29■□□□□ 0.84
GSDMD-210ENST00000531173 TBC1D2Q9BYX2 928 aa20.29■□□□□ 0.84
GSDMD-210ENST00000531173 IL1RAPL2Q9NP60 686 aa20.29■□□□□ 0.84
GSDMD-210ENST00000531173 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
GSDMD-210ENST00000531173 ECM2O94769 699 aaPredicted RBP20.28■□□□□ 0.84
GSDMD-210ENST00000531173 SHROOM1Q2M3G4 852 aaPredicted RBP20.28■□□□□ 0.84
GSDMD-210ENST00000531173 HSP90AB4PQ58FF6 505 aa20.28■□□□□ 0.84
GSDMD-210ENST00000531173 SH3D19Q5HYK7 790 aa20.28■□□□□ 0.84
GSDMD-210ENST00000531173 FOXP4Q8IVH2 680 aaPredicted RBP20.28■□□□□ 0.84
GSDMD-210ENST00000531173 MAGEB6Q8N7X4 407 aa20.28■□□□□ 0.84
GSDMD-210ENST00000531173 WDR18Q9BV38 432 aa20.28■□□□□ 0.84
GSDMD-210ENST00000531173 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
GSDMD-210ENST00000531173 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.84
GSDMD-210ENST00000531173 MIGA1Q8NAN2 632 aa20.27■□□□□ 0.84
GSDMD-210ENST00000531173 MYPNQ86TC9 1320 aa20.27■□□□□ 0.83
GSDMD-210ENST00000531173 HMGCS2P54868 508 aa20.26■□□□□ 0.83
GSDMD-210ENST00000531173 FCGRTP55899 365 aa20.26■□□□□ 0.83
GSDMD-210ENST00000531173 PRKCZQ05513 592 aa20.26■□□□□ 0.83
GSDMD-210ENST00000531173 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
GSDMD-210ENST00000531173 CERS3Q8IU89 383 aa20.26■□□□□ 0.83
GSDMD-210ENST00000531173 RIOK1Q9BRS2 568 aaKnown RBP20.26■□□□□ 0.83
GSDMD-210ENST00000531173 TMEM106CQ9BVX2 250 aa20.26■□□□□ 0.83
GSDMD-210ENST00000531173 ASNSP08243 561 aa20.25■□□□□ 0.83
GSDMD-210ENST00000531173 HOXD10P28358 340 aa20.25■□□□□ 0.83
GSDMD-210ENST00000531173 MAP3K12Q12852 859 aa20.25■□□□□ 0.83
GSDMD-210ENST00000531173 MTFR1Q15390 333 aa20.25■□□□□ 0.83
GSDMD-210ENST00000531173 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.25■□□□□ 0.83
GSDMD-210ENST00000531173 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
GSDMD-210ENST00000531173 SAP30BPQ9UHR5 308 aaKnown RBP20.25■□□□□ 0.83
GSDMD-210ENST00000531173 GABRQQ9UN88 632 aa20.25■□□□□ 0.83
GSDMD-210ENST00000531173 RANBP2P49792 3224 aaKnown RBP20.24■□□□□ 0.83
GSDMD-210ENST00000531173 GRK4P32298 578 aa20.24■□□□□ 0.83
GSDMD-210ENST00000531173 FAM110CQ1W6H9 321 aa20.24■□□□□ 0.83
GSDMD-210ENST00000531173 SMCR8Q8TEV9 937 aaPredicted RBP20.24■□□□□ 0.83
GSDMD-210ENST00000531173 GINM1Q9NU53 330 aa20.24■□□□□ 0.83
GSDMD-210ENST00000531173 HMMRO75330 724 aa20.23■□□□□ 0.83
GSDMD-210ENST00000531173 MYCP01106 439 aaPredicted RBP20.23■□□□□ 0.83
GSDMD-210ENST00000531173 BACE1P56817 501 aa20.23■□□□□ 0.83
GSDMD-210ENST00000531173 MTMR2Q13614 643 aa20.23■□□□□ 0.83
GSDMD-210ENST00000531173 PDE3AQ14432 1141 aa20.23■□□□□ 0.83
GSDMD-210ENST00000531173 TATDN1Q6P1N9 297 aa20.23■□□□□ 0.83
GSDMD-210ENST00000531173 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
GSDMD-210ENST00000531173 ANKRD13CQ8N6S4 541 aa20.23■□□□□ 0.83
GSDMD-210ENST00000531173 RAET1EQ8TD07 263 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms