RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 EVI5LQ96CN4 794 aa14.32□□□□□ -0.12
LTBP3-219ENST00000530990 DHX36Q9H2U1 1008 aaKnown RBP14.32□□□□□ -0.12
LTBP3-219ENST00000530990 PHF20L1A8MW92 1017 aa14.31□□□□□ -0.12
LTBP3-219ENST00000530990 M0R2C6 588 aa14.31□□□□□ -0.12
LTBP3-219ENST00000530990 PRKAB2O43741 272 aa14.31□□□□□ -0.12
LTBP3-219ENST00000530990 ZBTB48P10074 688 aaPredicted RBP14.31□□□□□ -0.12
LTBP3-219ENST00000530990 MAP2K1Q02750 393 aaPredicted RBP14.31□□□□□ -0.12
LTBP3-219ENST00000530990 OPTNQ96CV9 577 aa14.31□□□□□ -0.12
LTBP3-219ENST00000530990 DNAJC18Q9H819 358 aa14.31□□□□□ -0.12
LTBP3-219ENST00000530990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
LTBP3-219ENST00000530990 WBP1LQ9NX94 342 aa14.31□□□□□ -0.12
LTBP3-219ENST00000530990 SPDYE5A6NIY4 337 aa14.3□□□□□ -0.12
LTBP3-219ENST00000530990 TBC1D12O60347 775 aa14.3□□□□□ -0.12
LTBP3-219ENST00000530990 HLA-DOAP06340 250 aa14.3□□□□□ -0.12
LTBP3-219ENST00000530990 LRRFIP1Q32MZ4 808 aaKnown RBP14.3□□□□□ -0.12
LTBP3-219ENST00000530990 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
LTBP3-219ENST00000530990 OTUD5Q96G74 571 aa14.3□□□□□ -0.12
LTBP3-219ENST00000530990 DCP1AQ9NPI6 582 aaPredicted RBP14.3□□□□□ -0.12
LTBP3-219ENST00000530990 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
LTBP3-219ENST00000530990 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 GPAA1O43292 621 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 EVX2Q03828 476 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 ZMYM1Q5SVZ6 1142 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 CENPQQ7L2Z9 268 aaPredicted RBP14.29□□□□□ -0.12
LTBP3-219ENST00000530990 SCYL3Q8IZE3 742 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 RILPL2Q969X0 211 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 STRBPQ96SI9 672 aaKnown RBP14.29□□□□□ -0.12
LTBP3-219ENST00000530990 SEC62Q99442 399 aaKnown RBP14.29□□□□□ -0.12
LTBP3-219ENST00000530990 MCM9Q9NXL9 1143 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
LTBP3-219ENST00000530990 HERC5Q9UII4 1024 aaKnown RBP14.29□□□□□ -0.12
LTBP3-219ENST00000530990 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
LTBP3-219ENST00000530990 FOXN1O15353 648 aa14.28□□□□□ -0.12
LTBP3-219ENST00000530990 CTCFP49711 727 aaPredicted RBP14.28□□□□□ -0.12
LTBP3-219ENST00000530990 PLCD1P51178 756 aa14.28□□□□□ -0.12
LTBP3-219ENST00000530990 RRP1BQ14684 758 aaKnown RBP14.28□□□□□ -0.12
LTBP3-219ENST00000530990 METTL16Q86W50 562 aaKnown RBP14.28□□□□□ -0.12
LTBP3-219ENST00000530990 ERO1BQ86YB8 467 aa14.28□□□□□ -0.12
LTBP3-219ENST00000530990 CRACR2BQ8N4Y2 399 aaPredicted RBP14.28□□□□□ -0.12
LTBP3-219ENST00000530990 TRIM34Q9BYJ4 488 aa14.28□□□□□ -0.12
LTBP3-219ENST00000530990 ATP8A2Q9NTI2 1148 aa14.28□□□□□ -0.12
LTBP3-219ENST00000530990 MANSC4A6NHS7 340 aaPredicted RBP14.27□□□□□ -0.13
LTBP3-219ENST00000530990 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.13
LTBP3-219ENST00000530990 POLR3DP05423 398 aaPredicted RBP14.27□□□□□ -0.13
LTBP3-219ENST00000530990 CYP2D6P10635 497 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 GSPT1P15170 499 aaKnown RBP14.27□□□□□ -0.13
LTBP3-219ENST00000530990 SREBF2Q12772 1141 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 TTC22Q5TAA0 569 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 CCDC129Q6ZRS4 1044 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 TTC6Q86TZ1 520 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 EHD4Q9H223 541 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 SERPINB13Q9UIV8 391 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 TSKSQ9UJT2 592 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 LOC285556D6RIA3 1793 aa14.27□□□□□ -0.13
LTBP3-219ENST00000530990 A0A0D9SFI3 127 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 IRF6O14896 467 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 CAPN15O75808 1086 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 PTPRAP18433 802 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 PPATQ06203 517 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 PPIL2Q13356 520 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 CCDC84Q86UT8 332 aaPredicted RBP14.26□□□□□ -0.13
LTBP3-219ENST00000530990 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 FOXP4Q8IVH2 680 aaPredicted RBP14.26□□□□□ -0.13
LTBP3-219ENST00000530990 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
LTBP3-219ENST00000530990 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 EPB41L4AQ9HCS5 686 aaPredicted RBP14.26□□□□□ -0.13
LTBP3-219ENST00000530990 PRDM10Q9NQV6 1147 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 PICK1Q9NRD5 415 aa14.26□□□□□ -0.13
LTBP3-219ENST00000530990 CYP2D7A0A087X1C5 515 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 SMIM22K7EJ46 135 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 GDF11O95390 407 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 CAP2P40123 477 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 TM4SF4P48230 202 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 GABPAQ06546 454 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 NMIQ13287 307 aaPredicted RBP14.25□□□□□ -0.13
LTBP3-219ENST00000530990 SHROOM1Q2M3G4 852 aaPredicted RBP14.25□□□□□ -0.13
LTBP3-219ENST00000530990 DDRGK1Q96HY6 314 aa14.25□□□□□ -0.13
LTBP3-219ENST00000530990 GREB1LQ9C091 1923 aaPredicted RBP14.24□□□□□ -0.13
LTBP3-219ENST00000530990 CCL15-CCL14A0A0B4J2E2 113 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 USP17L12C9JPN9 530 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 USP17L21D6R901 530 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 IGF2BP3O00425 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
LTBP3-219ENST00000530990 CA12O43570 354 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 TRPA1O75762 1119 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 HSPA8P11142 646 aaKnown RBP14.24□□□□□ -0.13
LTBP3-219ENST00000530990 GNAT2P19087 354 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 SDSP20132 328 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 SHMT1P34896 483 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 GTF2A2P52657 109 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 JAG1P78504 1218 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 CCL15Q16663 113 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 BRI3BPQ8WY22 251 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 HELLSQ9NRZ9 838 aa14.24□□□□□ -0.13
LTBP3-219ENST00000530990 RNF186Q9NXI6 227 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms