RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 FAM83AQ86UY5 434 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 CERS3Q8IU89 383 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 ERO1AQ96HE7 468 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 RIOK1Q9BRS2 568 aaKnown RBP10.33□□□□□ -0.76
CTSF-208ENST00000530565 IDI2Q9BXS1 227 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 FAM198AQ9UFP1 575 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 PPP2R3BQ9Y5P8 575 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 RFX7Q2KHR2 1363 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 CDK5RAP2Q96SN8 1893 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 FOCADQ5VW36 1801 aa10.33□□□□□ -0.76
CTSF-208ENST00000530565 ENTPD3O75355 529 aa10.32□□□□□ -0.76
CTSF-208ENST00000530565 USP2O75604 605 aaPredicted RBP10.32□□□□□ -0.76
CTSF-208ENST00000530565 WDHD1O75717 1129 aaPredicted RBP10.32□□□□□ -0.76
CTSF-208ENST00000530565 NBPF12Q5TAG4 269 aaPredicted RBP10.32□□□□□ -0.76
CTSF-208ENST00000530565 APPBP2Q92624 585 aa10.32□□□□□ -0.76
CTSF-208ENST00000530565 PUS7LQ9H0K6 701 aaKnown RBP10.32□□□□□ -0.76
CTSF-208ENST00000530565 RPAP1Q9BWH6 1393 aaPredicted RBP10.31□□□□□ -0.76
CTSF-208ENST00000530565 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
CTSF-208ENST00000530565 NPM3O75607 178 aaKnown RBP10.31□□□□□ -0.76
CTSF-208ENST00000530565 MBD4O95243 580 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 SDSP20132 328 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 SP3Q02447 781 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 TCP10Q12799 353 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 PICALMQ13492 652 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 ZMYM1Q5SVZ6 1142 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 LCORLQ8N3X6 602 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 TGFBRAP1Q8WUH2 860 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 FAM151AQ8WW52 585 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 OSBP2Q969R2 916 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 ZNF333Q96JL9 665 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 MS4A4AQ96JQ5 239 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 TEPSINQ96N21 525 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 TMEM39BQ9GZU3 492 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 ARMT1Q9H993 441 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 EFCC1Q9HA90 598 aa10.31□□□□□ -0.76
CTSF-208ENST00000530565 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
CTSF-208ENST00000530565 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.31□□□□□ -0.76
CTSF-208ENST00000530565 KIAA0100Q14667 2235 aaKnown RBP10.31□□□□□ -0.76
CTSF-208ENST00000530565 M0R2C6 588 aa10.3□□□□□ -0.76
CTSF-208ENST00000530565 PPP1R12BO60237 982 aaPredicted RBP10.3□□□□□ -0.76
CTSF-208ENST00000530565 USP5P45974 858 aa10.3□□□□□ -0.76
CTSF-208ENST00000530565 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
CTSF-208ENST00000530565 MAPKAPK5Q8IW41 473 aa10.3□□□□□ -0.76
CTSF-208ENST00000530565 CDAN1Q8IWY9 1227 aa10.3□□□□□ -0.76
CTSF-208ENST00000530565 ZFPM1Q8IX07 1006 aa10.3□□□□□ -0.76
CTSF-208ENST00000530565 SEC62Q99442 399 aaKnown RBP10.3□□□□□ -0.76
CTSF-208ENST00000530565 CRNKL1Q9BZJ0 848 aaKnown RBP10.3□□□□□ -0.76
CTSF-208ENST00000530565 COLQQ9Y215 455 aaPredicted RBP10.3□□□□□ -0.76
CTSF-208ENST00000530565 FLT1P17948 1338 aa10.3□□□□□ -0.76
CTSF-208ENST00000530565 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
CTSF-208ENST00000530565 HIP1O00291 1037 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 GPAA1O43292 621 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 NMIQ13287 307 aaPredicted RBP10.29□□□□□ -0.76
CTSF-208ENST00000530565 BMP2KLQ5H9B9 411 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 SH3BP5LQ7L8J4 393 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 ZSCAN29Q8IWY8 852 aaPredicted RBP10.29□□□□□ -0.76
CTSF-208ENST00000530565 ANKRD13AQ8IZ07 590 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 CNKSR2Q8WXI2 1034 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 OTUD5Q96G74 571 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 FAM227BQ96M60 508 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
CTSF-208ENST00000530565 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
CTSF-208ENST00000530565 HELLSQ9NRZ9 838 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 PTCH2Q9Y6C5 1203 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 NAV1Q8NEY1 1877 aa10.29□□□□□ -0.76
CTSF-208ENST00000530565 ATRNL1Q5VV63 1379 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 DDX60LQ5H9U9 1706 aaKnown RBP10.28□□□□□ -0.76
CTSF-208ENST00000530565 A0A0D9SFI3 127 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 DDTLA6NHG4 134 aaPredicted RBP10.28□□□□□ -0.76
CTSF-208ENST00000530565 PRKAB2O43741 272 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 IREB2P48200 963 aaKnown RBP10.28□□□□□ -0.76
CTSF-208ENST00000530565 MCMDC2Q4G0Z9 681 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 OTUD7BQ6GQQ9 843 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.28□□□□□ -0.76
CTSF-208ENST00000530565 SDR42E1Q8WUS8 393 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 BRI3BPQ8WY22 251 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 OPTNQ96CV9 577 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 HOOK2Q96ED9 719 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 ELP3Q9H9T3 547 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 DIAPH3Q9NSV4 1193 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 SLC4A4Q9Y6R1 1079 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 MYH1P12882 1939 aa10.28□□□□□ -0.76
CTSF-208ENST00000530565 GNAT2P19087 354 aa10.27□□□□□ -0.77
CTSF-208ENST00000530565 CWC27Q6UX04 472 aaKnown RBP10.27□□□□□ -0.77
CTSF-208ENST00000530565 CCDC129Q6ZRS4 1044 aa10.27□□□□□ -0.77
CTSF-208ENST00000530565 FAM43AQ8N2R8 423 aa10.27□□□□□ -0.77
CTSF-208ENST00000530565 DHX36Q9H2U1 1008 aaKnown RBP10.27□□□□□ -0.77
CTSF-208ENST00000530565 DCP1AQ9NPI6 582 aaPredicted RBP10.27□□□□□ -0.77
CTSF-208ENST00000530565 ATP8A2Q9NTI2 1148 aa10.27□□□□□ -0.77
CTSF-208ENST00000530565 SAP30BPQ9UHR5 308 aaKnown RBP10.27□□□□□ -0.77
CTSF-208ENST00000530565 SIPA1L1O43166 1804 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 COL6A3P12111 3177 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 GSG1L2A8MUP6 293 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 PATL2C9JE40 543 aaKnown RBP10.26□□□□□ -0.77
CTSF-208ENST00000530565 CHMLP26374 656 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 VGLL4Q14135 290 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 SLC9C1Q4G0N8 1177 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 DCAF15Q66K64 600 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms