RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TET3O43151 1660 aa7.64□□□□□ -1.19
AMBRA1-209ENST00000529963 XIRP1Q702N8 1843 aaKnown RBP7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 XRCC5P13010 732 aaKnown RBP7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 NLRP12P59046 1061 aa7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 GSTM4Q03013 218 aa7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 TRIM28Q13263 835 aaKnown RBP7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 FMR1NBQ8N0W7 255 aaPredicted RBP7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 CRELD1Q96HD1 420 aa7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 KCNK4Q9NYG8 393 aa7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 MSH6P52701 1360 aa7.63□□□□□ -1.19
AMBRA1-209ENST00000529963 FAM181BA6NEQ2 426 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 RECKO95980 971 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 B3GALT4O96024 378 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 CELA3AP09093 270 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 RAC1P63000 192 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 PTPN12Q05209 780 aaKnown RBP7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 SHISA2Q6UWI4 295 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 TMEM87AQ8NBN3 555 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 NWD1Q149M9 1564 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 PLEKHG1Q9ULL1 1385 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 SPATA31A6Q5VVP1 1343 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 F6X3S4 739 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 TM4SF5O14894 197 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 PAGE1O75459 146 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 C19orf57Q0VDD7 668 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 TRIM56Q9BRZ2 755 aaKnown RBP7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 BCL11AQ9H165 835 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 STK17AQ9UEE5 414 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 ZFYVE9O95405 1425 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 RIMS2Q9UQ26 1411 aa7.62□□□□□ -1.19
AMBRA1-209ENST00000529963 SRCAPQ6ZRS2 3230 aa7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 ROBO1Q9Y6N7 1651 aa7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 ADAM11O75078 769 aa7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 ECEL1O95672 775 aa7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 TAF1CQ15572 869 aaPredicted RBP7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 CCDC85BQ15834 202 aaPredicted RBP7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 MAP3K11Q16584 847 aa7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 NOP53Q9NZM5 478 aaKnown RBP7.61□□□□□ -1.19
AMBRA1-209ENST00000529963 PHLPP1O60346 1717 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 PIK3R2O00459 728 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 ENC1O14682 589 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 ARL4DP49703 201 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 PRRT3Q5FWE3 981 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 RPS26P11Q5JNZ5 115 aaPredicted RBP7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 NECAB3Q96P71 396 aaPredicted RBP7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 ZC3H12CQ9C0D7 883 aaKnown RBP7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 TMEM39AQ9NV64 488 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 TBX22Q9Y458 520 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 ROCK1Q13464 1354 aa7.6□□□□□ -1.19
AMBRA1-209ENST00000529963 UNC13BO14795 1591 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 NCOA3Q9Y6Q9 1424 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 SPDYE3A6NKU9 549 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 WISP1O95388 367 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 CD68P34810 354 aaPredicted RBP7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 DTWD1Q8N5C7 304 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 USP26Q9BXU7 913 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 ZFYVE1Q9HBF4 777 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 PPM1HQ9ULR3 514 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 TMEM131LA2VDJ0 1609 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
AMBRA1-209ENST00000529963 GCC2Q8IWJ2 1684 aa7.59□□□□□ -1.2
AMBRA1-209ENST00000529963 DLL1O00548 723 aa7.58□□□□□ -1.2
AMBRA1-209ENST00000529963 SUZ12Q15022 739 aaKnown RBP7.58□□□□□ -1.2
AMBRA1-209ENST00000529963 RASIP1Q5U651 963 aa7.58□□□□□ -1.2
AMBRA1-209ENST00000529963 C9orf131Q5VYM1 1079 aa7.58□□□□□ -1.2
AMBRA1-209ENST00000529963 KLHL23Q8NBE8 558 aa7.58□□□□□ -1.2
AMBRA1-209ENST00000529963 UBASH3BQ8TF42 649 aa7.58□□□□□ -1.2
AMBRA1-209ENST00000529963 OSGEPQ9NPF4 335 aa7.58□□□□□ -1.2
AMBRA1-209ENST00000529963 E9PSI1 815 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 CTSBP07858 339 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 SELPP16109 830 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 VAMP1P23763 118 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 WNT8BQ93098 351 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 PIK3R4Q99570 1358 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 DIP2AQ14689 1571 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 CHD2O14647 1828 aaKnown RBP7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 NUP155O75694 1391 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 DLGAP3O95886 979 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 SPATA31C1P0DKV0 1188 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 ELNP15502 786 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 ATF3P18847 181 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 MAOBP27338 520 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 PPP2R3AQ06190 1150 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 MPRIPQ6WCQ1 1025 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 MAP4K3Q8IVH8 894 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 CEP44Q9C0F1 390 aa7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
AMBRA1-209ENST00000529963 MYO5BQ9ULV0 1848 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 IQGAP3Q86VI3 1631 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 ADAMTS13Q76LX8 1427 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 ALX3O95076 343 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 ITGAEP38570 1179 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 ST13P50502 369 aaKnown RBP7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 POU4F3Q15319 338 aa7.56□□□□□ -1.2
AMBRA1-209ENST00000529963 DUOXA2Q1HG44 320 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms