RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 INPP5AQ14642 412 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 IFI16Q16666 785 aaKnown RBP5.94□□□□□ -1.46
CTR9-205ENST00000529898 UBE3DQ7Z6J8 389 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 NPAS4Q8IUM7 802 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 TOP6BLQ8N6T0 577 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 FAM181AQ8N9Y4 354 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 DUSP9Q99956 384 aaKnown RBP5.94□□□□□ -1.46
CTR9-205ENST00000529898 SSU72Q9NP77 194 aaKnown RBP5.94□□□□□ -1.46
CTR9-205ENST00000529898 PRDM10Q9NQV6 1147 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 TACC3Q9Y6A5 838 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 SNCAIPQ9Y6H5 919 aa5.94□□□□□ -1.46
CTR9-205ENST00000529898 TMEM265A0A087WTH1 108 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 CEACAM5P06731 702 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 JUNBP17275 347 aaPredicted RBP5.93□□□□□ -1.46
CTR9-205ENST00000529898 FUT4P22083 530 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 EAPPQ56P03 285 aaPredicted RBP5.93□□□□□ -1.46
CTR9-205ENST00000529898 TTBK2Q6IQ55 1244 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 LRFN4Q6PJG9 635 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 AGMOQ6ZNB7 445 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 ZNF507Q8TCN5 953 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 UBE2Q2Q8WVN8 375 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 RNF19AQ9NV58 838 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 TTF2Q9UNY4 1162 aaKnown RBP5.93□□□□□ -1.46
CTR9-205ENST00000529898 CSADQ9Y600 493 aa5.93□□□□□ -1.46
CTR9-205ENST00000529898 GFRA2O00451 464 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 LRIG2O94898 1065 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 EOMESO95936 686 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 DAB2P98082 770 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 BNIP3Q12983 259 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 SLBPQ14493 270 aaKnown RBP eCLIP5.92□□□□□ -1.46
CTR9-205ENST00000529898 HDXQ7Z353 690 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 WNT10AQ9GZT5 417 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 GTF2IRD1Q9UHL9 959 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 RNF114Q9Y508 228 aa5.92□□□□□ -1.46
CTR9-205ENST00000529898 CD8BP10966 210 aa5.91□□□□□ -1.46
CTR9-205ENST00000529898 PDIA4P13667 645 aaKnown RBP5.91□□□□□ -1.46
CTR9-205ENST00000529898 ST13P50502 369 aaKnown RBP5.91□□□□□ -1.46
CTR9-205ENST00000529898 ZNF574Q6ZN55 896 aaPredicted RBP5.91□□□□□ -1.46
CTR9-205ENST00000529898 C22orf34Q6ZV56 151 aa5.91□□□□□ -1.46
CTR9-205ENST00000529898 FBXO33Q7Z6M2 555 aa5.91□□□□□ -1.46
CTR9-205ENST00000529898 KRTAP1-3Q8IUG1 177 aa5.91□□□□□ -1.46
CTR9-205ENST00000529898 ELMO3Q96BJ8 720 aa5.91□□□□□ -1.46
CTR9-205ENST00000529898 PLPPR2Q96GM1 343 aa5.91□□□□□ -1.46
CTR9-205ENST00000529898 NOC4LQ9BVI4 516 aaKnown RBP5.91□□□□□ -1.46
CTR9-205ENST00000529898 CCDC85BQ15834 202 aaPredicted RBP5.9□□□□□ -1.46
CTR9-205ENST00000529898 ZNF792Q3KQV3 632 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.9□□□□□ -1.46
CTR9-205ENST00000529898 CDC37L1Q7L3B6 337 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 ARMCX6Q7L4S7 300 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 TMC4Q7Z404 712 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 SPACA3Q8IXA5 215 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 HRASLS5Q96KN8 279 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 FBRSQ9HAH7 460 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 PARP2Q9UGN5 583 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 MAPK8IP1Q9UQF2 711 aa5.9□□□□□ -1.46
CTR9-205ENST00000529898 USP31Q70CQ4 1352 aa5.9□□□□□ -1.47
CTR9-205ENST00000529898 SLITRK5O94991 958 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 CTSHP09668 335 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 RLBP1P12271 317 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 AOC3Q16853 763 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 NKPD1Q17RQ9 610 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 AEBP1Q8IUX7 1158 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 MFSD2AQ8NA29 543 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 ASIC4Q96FT7 647 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 FOXQ1Q9C009 403 aa5.89□□□□□ -1.47
CTR9-205ENST00000529898 MBNL3Q9NUK0 354 aaKnown RBP5.89□□□□□ -1.47
CTR9-205ENST00000529898 PAPLNO95428 1278 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 ZNF865P0CJ78 1059 aaPredicted RBP5.88□□□□□ -1.47
CTR9-205ENST00000529898 ERCC3P19447 782 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 CDK8P49336 464 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 LIG3P49916 1009 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 PLCL1Q15111 1095 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 TAF1CQ15572 869 aaPredicted RBP5.88□□□□□ -1.47
CTR9-205ENST00000529898 NKG7Q16617 165 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 ATG4DQ86TL0 474 aaPredicted RBP5.88□□□□□ -1.47
CTR9-205ENST00000529898 CCDC84Q86UT8 332 aaPredicted RBP5.88□□□□□ -1.47
CTR9-205ENST00000529898 HID1Q8IV36 788 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 PICK1Q9NRD5 415 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 PCDHB5Q9Y5E4 795 aa5.88□□□□□ -1.47
CTR9-205ENST00000529898 CST3P01034 146 aaPredicted RBP5.87□□□□□ -1.47
CTR9-205ENST00000529898 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
CTR9-205ENST00000529898 TFE3P19532 575 aaPredicted RBP5.87□□□□□ -1.47
CTR9-205ENST00000529898 CLCN7P51798 805 aa5.87□□□□□ -1.47
CTR9-205ENST00000529898 WIPI1Q5MNZ9 446 aaPredicted RBP5.87□□□□□ -1.47
CTR9-205ENST00000529898 MEI1Q5TIA1 1274 aa5.87□□□□□ -1.47
CTR9-205ENST00000529898 SLC23A3Q6PIS1 610 aa5.87□□□□□ -1.47
CTR9-205ENST00000529898 ASB11Q8WXH4 323 aa5.87□□□□□ -1.47
CTR9-205ENST00000529898 ADAMTS6Q9UKP5 1117 aa5.87□□□□□ -1.47
CTR9-205ENST00000529898 PITPNM2Q9BZ72 1349 aa5.86□□□□□ -1.47
CTR9-205ENST00000529898 CNTNAP4Q9C0A0 1308 aa5.86□□□□□ -1.47
CTR9-205ENST00000529898 PRAMEF27A3QJZ7 478 aa5.86□□□□□ -1.47
CTR9-205ENST00000529898 CD96P40200 585 aa5.86□□□□□ -1.47
CTR9-205ENST00000529898 ANGEL2Q5VTE6 544 aaKnown RBP5.86□□□□□ -1.47
CTR9-205ENST00000529898 ARHGAP27Q6ZUM4 889 aa5.86□□□□□ -1.47
CTR9-205ENST00000529898 MRPL41Q8IXM3 137 aaKnown RBP5.86□□□□□ -1.47
CTR9-205ENST00000529898 POU5F2Q8N7G0 328 aa5.86□□□□□ -1.47
CTR9-205ENST00000529898 ANP32EQ9BTT0 268 aa5.86□□□□□ -1.47
CTR9-205ENST00000529898 PRDM5Q9NQX1 630 aaPredicted RBP5.86□□□□□ -1.47
CTR9-205ENST00000529898 LMCD1Q9NZU5 365 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms