RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 KIAA1522Q9P206 1035 aaPredicted RBP7.62□□□□□ -1.19
ATPAF1-209ENST00000529214 ABCF2Q9UG63 623 aa7.62□□□□□ -1.19
ATPAF1-209ENST00000529214 PCDHAC2Q9Y5I4 1007 aa7.62□□□□□ -1.19
ATPAF1-209ENST00000529214 COL1A1P02452 1464 aaPredicted RBP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 ASTN2O75129 1339 aaPredicted RBP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 PASKQ96RG2 1323 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 ZNF646O15015 1829 aaPredicted RBP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 ZAP70P43403 619 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 RBM5P52756 815 aaKnown RBP eCLIP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 ANKRD45Q5TZF3 282 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 ANGEL2Q5VTE6 544 aaKnown RBP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 APOBEC3HQ6NTF7 200 aaKnown RBP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 USP48Q86UV5 1035 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 TEKT1Q969V4 418 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 ZDHHC15Q96MV8 337 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 BEGAINQ9BUH8 593 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 GLIS2Q9BZE0 524 aaPredicted RBP7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 GGA3Q9NZ52 723 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 ADAMTSL1Q8N6G6 1762 aa7.61□□□□□ -1.19
ATPAF1-209ENST00000529214 MAST3O60307 1309 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 PITPNM2Q9BZ72 1349 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 TRAF5O00463 557 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 MYO1BO43795 1136 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 HSPA6P17066 643 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 ATP5JP18859 108 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 OSBPP22059 807 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 APLP1P51693 650 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 FMR1Q06787 632 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 DLK2Q6UY11 383 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 KRT26Q7Z3Y9 468 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 SULF1Q8IWU6 871 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 NSUN4Q96CB9 384 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 DRC1Q96MC2 740 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 TDRD3Q9H7E2 651 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 PRM3Q9NNZ6 103 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 LRP2BPQ9P2M1 347 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 ARAP2Q8WZ64 1704 aa7.6□□□□□ -1.19
ATPAF1-209ENST00000529214 AOX1Q06278 1338 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 LDHCP07864 332 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 SSTR3P32745 418 aaPredicted RBP7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 CLK2P49760 499 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 MECOMQ03112 1051 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 DIXDC1Q155Q3 683 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 CST9Q5W186 159 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 SLF2Q8IX21 1173 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 ZNF384Q8TF68 577 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 SPATA32Q96LK8 384 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 BOLA2Q9H3K6 86 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 ANTXR1Q9H6X2 564 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 PIH1D3Q9NQM4 214 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 ECHDC1Q9NTX5 307 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 RAI14Q9P0K7 980 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 ZNF70Q9UC06 446 aaPredicted RBP7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 SCAF8Q9UPN6 1271 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 GNEQ9Y223 722 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 DAGLAQ9Y4D2 1042 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 NDUFB9Q9Y6M9 179 aa7.59□□□□□ -1.19
ATPAF1-209ENST00000529214 GPR75-ASB3A0A0A6YYF3 556 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 CLRN2A0PK11 232 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 TMEM88BA6NKF7 163 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 ADM5C9JUS6 153 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 GSTO1P78417 241 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 MDM2Q00987 491 aaPredicted RBP7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 NUCB1Q02818 461 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 TTF1Q15361 905 aaPredicted RBP7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 MYSM1Q5VVJ2 828 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 B4GALNT3Q6L9W6 998 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 DZIP1Q86YF9 867 aaKnown RBP7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 APOBEC3FQ8IUX4 373 aaKnown RBP7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 SREK1Q8WXA9 508 aaKnown RBP7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 HAUS7Q99871 368 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 DEFB129Q9H1M3 183 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 GAKO14976 1311 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 SALL3Q9BXA9 1300 aa7.58□□□□□ -1.2
ATPAF1-209ENST00000529214 GOLIM4O00461 696 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 RASA3Q14644 834 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 FKBP1CQ5VVH2 108 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 PRAMEF18Q5VWM3 479 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 NAA16Q6N069 864 aaPredicted RBP7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 CDC42EP5Q6NZY7 148 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 CHD1LQ86WJ1 897 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 OTUD7AQ8TE49 926 aaPredicted RBP7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 VEZTQ9HBM0 779 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 USP40Q9NVE5 1235 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 STAP2Q9UGK3 403 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 PPP2R3BQ9Y5P8 575 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 TTC41PQ6P2S7 1318 aa7.57□□□□□ -1.2
ATPAF1-209ENST00000529214 TCP10L2B9ZVM9 353 aa7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 CLGNO14967 610 aa7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 IDH1O75874 414 aaKnown RBP7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 CELF2O95319 508 aaKnown RBP7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 MAP4K4O95819 1239 aaPredicted RBP7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 HOXB1P14653 301 aaPredicted RBP7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 TCF3P15923 654 aa7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 ERCC3P19447 782 aa7.56□□□□□ -1.2
ATPAF1-209ENST00000529214 MX1P20591 662 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms