RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 FAM196BA6NMK8 535 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 CTNND1O60716 968 aaKnown RBP18■□□□□ 0.47
CCDC18-210ENST00000528942 IGHDP01880 384 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 HLA-DOAP06340 250 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 PPATQ06203 517 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 UBE3CQ15386 1083 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 IFNL1Q8IU54 200 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 TRIM34Q9BYJ4 488 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 PALD1Q9ULE6 856 aa18■□□□□ 0.47
CCDC18-210ENST00000528942 TESPA1A2RU30 521 aaPredicted RBP17.99■□□□□ 0.47
CCDC18-210ENST00000528942 MBD4O95243 580 aa17.99■□□□□ 0.47
CCDC18-210ENST00000528942 SNAPC2Q13487 334 aa17.99■□□□□ 0.47
CCDC18-210ENST00000528942 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
CCDC18-210ENST00000528942 OTUD7BQ6GQQ9 843 aa17.99■□□□□ 0.47
CCDC18-210ENST00000528942 LCORLQ8N3X6 602 aa17.99■□□□□ 0.47
CCDC18-210ENST00000528942 CRACR2BQ8N4Y2 399 aaPredicted RBP17.99■□□□□ 0.47
CCDC18-210ENST00000528942 MS4A4AQ96JQ5 239 aa17.99■□□□□ 0.47
CCDC18-210ENST00000528942 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
CCDC18-210ENST00000528942 PHIPQ8WWQ0 1821 aa17.99■□□□□ 0.47
CCDC18-210ENST00000528942 CCL15-CCL14A0A0B4J2E2 113 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 IGF2BP3O00425 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCDC18-210ENST00000528942 IRF6O14896 467 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 ZFYP08048 801 aaPredicted RBP17.98■□□□□ 0.47
CCDC18-210ENST00000528942 SLURP2P0DP57 97 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 CETPP11597 493 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 CCL15Q16663 113 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 CFHR5Q9BXR6 569 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 ARMT1Q9H993 441 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 STAP2Q9UGK3 403 aa17.98■□□□□ 0.47
CCDC18-210ENST00000528942 PDE1AP54750 535 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 NUCB1Q02818 461 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 SLC4A8Q2Y0W8 1093 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 SLFNL1Q499Z3 407 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 METTL16Q86W50 562 aaKnown RBP17.97■□□□□ 0.47
CCDC18-210ENST00000528942 CHD1LQ86WJ1 897 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 BRI3BPQ8WY22 251 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 PTPRFP10586 1907 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
CCDC18-210ENST00000528942 CHGBP05060 677 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 PTPRAP18433 802 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 TTC6Q86TZ1 520 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 FOXP4Q8IVH2 680 aaPredicted RBP17.96■□□□□ 0.47
CCDC18-210ENST00000528942 SDR42E1Q8WUS8 393 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 FSD1Q9BTV5 496 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 EHD4Q9H223 541 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 DNAJC18Q9H819 358 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 KCNH4Q9UQ05 1017 aa17.96■□□□□ 0.47
CCDC18-210ENST00000528942 BAZ2AQ9UIF9 1905 aaKnown RBP17.96■□□□□ 0.47
CCDC18-210ENST00000528942 RNF113AO15541 343 aaKnown RBP17.95■□□□□ 0.46
CCDC18-210ENST00000528942 TBC1D8O95759 1140 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 CAP2P40123 477 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 APPBP2Q92624 585 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 PTPN18Q99952 460 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 SERPINB13Q9UIV8 391 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
CCDC18-210ENST00000528942 MYH8P13535 1937 aa17.94■□□□□ 0.46
CCDC18-210ENST00000528942 POLR3DP05423 398 aaPredicted RBP17.94■□□□□ 0.46
CCDC18-210ENST00000528942 NOM1Q5C9Z4 860 aaKnown RBP17.94■□□□□ 0.46
CCDC18-210ENST00000528942 TNS4Q8IZW8 715 aa17.94■□□□□ 0.46
CCDC18-210ENST00000528942 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
CCDC18-210ENST00000528942 DCP1AQ9NPI6 582 aaPredicted RBP17.94■□□□□ 0.46
CCDC18-210ENST00000528942 ATP8A2Q9NTI2 1148 aa17.94■□□□□ 0.46
CCDC18-210ENST00000528942 LOC285556D6RIA3 1793 aa17.94■□□□□ 0.46
CCDC18-210ENST00000528942 CXCL11O14625 94 aa17.93■□□□□ 0.46
CCDC18-210ENST00000528942 TBC1D2Q9BYX2 928 aa17.93■□□□□ 0.46
CCDC18-210ENST00000528942 ZCCHC17Q9NP64 241 aaKnown RBP17.93■□□□□ 0.46
CCDC18-210ENST00000528942 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.93■□□□□ 0.46
CCDC18-210ENST00000528942 TRIM75PA6NK02 468 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 PRKAB2O43741 272 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 ASNSP08243 561 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 CRHR2Q13324 411 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 AMOTL1Q8IY63 956 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 FAM43AQ8N2R8 423 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 EVI5LQ96CN4 794 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 AFG3L2Q9Y4W6 797 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 SLC4A4Q9Y6R1 1079 aa17.92■□□□□ 0.46
CCDC18-210ENST00000528942 A0A0G2JLL6 359 aaPredicted RBP17.91■□□□□ 0.46
CCDC18-210ENST00000528942 BTBD19C9JJ37 291 aa17.91■□□□□ 0.46
CCDC18-210ENST00000528942 PLCD1P51178 756 aa17.91■□□□□ 0.46
CCDC18-210ENST00000528942 RRP1BQ14684 758 aaKnown RBP17.91■□□□□ 0.46
CCDC18-210ENST00000528942 TAF1CQ15572 869 aaPredicted RBP17.91■□□□□ 0.46
CCDC18-210ENST00000528942 PRRT2Q7Z6L0 340 aaPredicted RBP17.91■□□□□ 0.46
CCDC18-210ENST00000528942 OSBP2Q969R2 916 aa17.91■□□□□ 0.46
CCDC18-210ENST00000528942 GINM1Q9NU53 330 aa17.91■□□□□ 0.46
CCDC18-210ENST00000528942 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
CCDC18-210ENST00000528942 USP17L5A8MUK1 530 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 GPR25O00155 361 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 GPAA1O43292 621 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 GDF11O95390 407 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 GNAT2P19087 354 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 TATDN1Q6P1N9 297 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 ANKRD23Q86SG2 305 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 CCDC84Q86UT8 332 aaPredicted RBP17.9■□□□□ 0.46
CCDC18-210ENST00000528942 ZNF296Q8WUU4 475 aaPredicted RBP17.9■□□□□ 0.46
CCDC18-210ENST00000528942 STRBPQ96SI9 672 aaKnown RBP17.9■□□□□ 0.46
CCDC18-210ENST00000528942 R3HDMLQ9H3Y0 253 aa17.9■□□□□ 0.46
CCDC18-210ENST00000528942 AS3MTQ9HBK9 375 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms