RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 PALD1Q9ULE6 856 aa17.2■□□□□ 0.34
UBXN1-209ENST00000528907 USP17L12C9JPN9 530 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 USP17L21D6R901 530 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 APPP05067 770 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 GABPAQ06546 454 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 PRAMEF18Q5VWM3 479 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 CST9Q5W186 159 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 DLK2Q6UY11 383 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 NAPBQ9H115 298 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 ZNF112Q9UJU3 913 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 ANAPC4Q9UJX5 808 aa17.19■□□□□ 0.34
UBXN1-209ENST00000528907 PPP1R12BO60237 982 aaPredicted RBP17.18■□□□□ 0.34
UBXN1-209ENST00000528907 EIF5BO60841 1220 aaKnown RBP17.18■□□□□ 0.34
UBXN1-209ENST00000528907 FGAP02671 866 aa17.18■□□□□ 0.34
UBXN1-209ENST00000528907 POLR3DP05423 398 aaPredicted RBP17.18■□□□□ 0.34
UBXN1-209ENST00000528907 TDO2P48775 406 aa17.18■□□□□ 0.34
UBXN1-209ENST00000528907 PLCD1P51178 756 aa17.18■□□□□ 0.34
UBXN1-209ENST00000528907 FMR1Q06787 632 aaKnown RBP eCLIP17.18■□□□□ 0.34
UBXN1-209ENST00000528907 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
UBXN1-209ENST00000528907 SAP30BPQ9UHR5 308 aaKnown RBP17.18■□□□□ 0.34
UBXN1-209ENST00000528907 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
UBXN1-209ENST00000528907 SERPINB13Q9UIV8 391 aa17.18■□□□□ 0.34
UBXN1-209ENST00000528907 OTOFQ9HC10 1997 aa17.17■□□□□ 0.34
UBXN1-209ENST00000528907 FOXN1O15353 648 aa17.17■□□□□ 0.34
UBXN1-209ENST00000528907 USP2O75604 605 aaPredicted RBP17.17■□□□□ 0.34
UBXN1-209ENST00000528907 CELF2O95319 508 aaKnown RBP17.17■□□□□ 0.34
UBXN1-209ENST00000528907 TATDN1Q6P1N9 297 aa17.17■□□□□ 0.34
UBXN1-209ENST00000528907 ZNF341Q9BYN7 854 aa17.17■□□□□ 0.34
UBXN1-209ENST00000528907 LSG1Q9H089 658 aaKnown RBP17.17■□□□□ 0.34
UBXN1-209ENST00000528907 GBA2Q9HCG7 927 aaPredicted RBP17.17■□□□□ 0.34
UBXN1-209ENST00000528907 SWAP70Q9UH65 585 aa17.17■□□□□ 0.34
UBXN1-209ENST00000528907 NT5C2P49902 561 aa17.16■□□□□ 0.34
UBXN1-209ENST00000528907 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
UBXN1-209ENST00000528907 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
UBXN1-209ENST00000528907 C2orf69Q8N8R5 385 aa17.16■□□□□ 0.34
UBXN1-209ENST00000528907 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.344e-9■□□□□ 9
UBXN1-209ENST00000528907 DNAJC18Q9H819 358 aa17.16■□□□□ 0.34
UBXN1-209ENST00000528907 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
UBXN1-209ENST00000528907 MYH8P13535 1937 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 PHF20L1A8MW92 1017 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 FGRP09769 529 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 CYP2D6P10635 497 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 PCP11498 1178 aaKnown RBP17.15■□□□□ 0.34
UBXN1-209ENST00000528907 PTH1RQ03431 593 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 PPARAQ07869 468 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 LDLRAD1Q5T700 205 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 C16orf86Q6ZW13 317 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 HHIPL1Q96JK4 782 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
UBXN1-209ENST00000528907 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
UBXN1-209ENST00000528907 DOCK1Q14185 1865 aa17.14■□□□□ 0.33
UBXN1-209ENST00000528907 REC8O95072 547 aa17.14■□□□□ 0.33
UBXN1-209ENST00000528907 IREB2P48200 963 aaKnown RBP17.14■□□□□ 0.33
UBXN1-209ENST00000528907 CTCFP49711 727 aaPredicted RBP17.14■□□□□ 0.33
UBXN1-209ENST00000528907 NOL9Q5SY16 702 aaKnown RBP17.14■□□□□ 0.33
UBXN1-209ENST00000528907 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.33
UBXN1-209ENST00000528907 TLL2Q9Y6L7 1015 aa17.14■□□□□ 0.33
UBXN1-209ENST00000528907 ATAD5Q96QE3 1844 aa17.14■□□□□ 0.33
UBXN1-209ENST00000528907 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 MINDY4BA8MYZ0 360 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 CTNND1O60716 968 aaKnown RBP17.13■□□□□ 0.33
UBXN1-209ENST00000528907 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
UBXN1-209ENST00000528907 MAP3K9P80192 1104 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 MIGA2Q7L4E1 593 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 SAPCD2Q86UD0 394 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 ANKRD13AQ8IZ07 590 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 ZNF408Q9H9D4 720 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 ZNF287Q9HBT7 754 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
UBXN1-209ENST00000528907 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
UBXN1-209ENST00000528907 GREB1LQ9C091 1923 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-209ENST00000528907 ZNF213O14771 459 aa17.12■□□□□ 0.33
UBXN1-209ENST00000528907 SHMT1P34896 483 aa17.12■□□□□ 0.33
UBXN1-209ENST00000528907 CDK8P49336 464 aa17.12■□□□□ 0.33
UBXN1-209ENST00000528907 EVX2Q03828 476 aa17.12■□□□□ 0.33
UBXN1-209ENST00000528907 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
UBXN1-209ENST00000528907 IMMTQ16891 758 aaKnown RBP17.12■□□□□ 0.33
UBXN1-209ENST00000528907 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
UBXN1-209ENST00000528907 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
UBXN1-209ENST00000528907 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBXN1-209ENST00000528907 CAP2P40123 477 aa17.11■□□□□ 0.33
UBXN1-209ENST00000528907 PDE4BQ07343 736 aa17.11■□□□□ 0.33
UBXN1-209ENST00000528907 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-209ENST00000528907 STAG1Q8WVM7 1258 aa17.11■□□□□ 0.33
UBXN1-209ENST00000528907 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
UBXN1-209ENST00000528907 WRNIP1Q96S55 665 aa17.11■□□□□ 0.33
UBXN1-209ENST00000528907 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
UBXN1-209ENST00000528907 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 ORC4O43929 436 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 CYP21A2P08686 494 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 SLURP2P0DP57 97 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 TTLL12Q14166 644 aaPredicted RBP17.1■□□□□ 0.33
UBXN1-209ENST00000528907 SCYL3Q8IZE3 742 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 KCNB2Q92953 911 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 DYNLL2Q96FJ2 89 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 NBPF3Q9H094 633 aa17.1■□□□□ 0.33
UBXN1-209ENST00000528907 RNF41Q9H4P4 317 aaPredicted RBP17.1■□□□□ 0.33
UBXN1-209ENST00000528907 PHIPQ8WWQ0 1821 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms