RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 SLC26A6Q9BXS9 759 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 NACAP1Q9BZK3 213 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 RNF41Q9H4P4 317 aaPredicted RBP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 ARMT1Q9H993 441 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 INCENPQ9NQS7 918 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 HOOK1Q9UJC3 728 aaKnown RBP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 MAN1B1Q9UKM7 699 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 SRPRBQ9Y5M8 271 aaKnown RBP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 ITGB4P16144 1822 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 MYH3P11055 1940 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 PHLPP2Q6ZVD8 1323 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 DOCK2Q92608 1830 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 BTBD18B2RXH4 712 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 EXOC5O00471 708 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 FGRP09769 529 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 ZNF18P17022 549 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 GUCY1A2P33402 732 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 ETF1P62495 437 aaKnown RBP9.62□□□□□ -0.87
CSTF3-208ENST00000528865 GNL2Q13823 731 aaKnown RBP9.62□□□□□ -0.87
CSTF3-208ENST00000528865 WTAPQ15007 396 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 SEC23AQ15436 765 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 TRIM65Q6PJ69 517 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 TMEM139Q8IV31 216 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 REXO1L1PQ8IX06 675 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 DIS3L2Q8IYB7 885 aaKnown RBP9.62□□□□□ -0.87
CSTF3-208ENST00000528865 TRIM22Q8IYM9 498 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 FANCBQ8NB91 859 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
CSTF3-208ENST00000528865 FANCLQ9NW38 375 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
CSTF3-208ENST00000528865 SLIT2O94813 1529 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 NUP98P52948 1817 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 SPDYE4A6NLX3 237 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 ZBTB22O15209 634 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 PRKAB2O43741 272 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 TOP1P11387 765 aaKnown RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 H2AFXP16104 143 aaPredicted RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 ERCC5P28715 1186 aaPredicted RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 HSPA2P54652 639 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 GABPB1Q06547 395 aaPredicted RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 PDE4BQ07343 736 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 TMED8Q6PL24 325 aaPredicted RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 SH3RF1Q7Z6J0 888 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 LCORLQ8N3X6 602 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 HELBQ8NG08 1087 aaPredicted RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 PKNOX2Q96KN3 472 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 MYL10Q9BUA6 226 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 SRRTQ9BXP5 876 aaKnown RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 RNF26Q9BY78 433 aaPredicted RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 INTS13Q9NVM9 706 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 BTG4Q9NY30 223 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 AATFQ9NY61 560 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 CEP131Q9UPN4 1083 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 SLC4A4Q9Y6R1 1079 aa9.61□□□□□ -0.87
CSTF3-208ENST00000528865 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.61□□□□□ -0.87
CSTF3-208ENST00000528865 ZNF804BA4D1E1 1349 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 MYO5AQ9Y4I1 1855 aaKnown RBP9.6□□□□□ -0.87
CSTF3-208ENST00000528865 ERICH2A1L162 156 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 GOLGA6L9A6NEM1 432 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 UBE2Q2LH0YL09 131 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 ARHGAP6O43182 974 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 ZSCAN12O43309 604 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 PRPF3O43395 683 aaKnown RBP9.6□□□□□ -0.87
CSTF3-208ENST00000528865 ACTN4O43707 911 aaKnown RBP9.6□□□□□ -0.87
CSTF3-208ENST00000528865 CAMTA2O94983 1202 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 SERPINC1P01008 464 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 PCP11498 1178 aaKnown RBP9.6□□□□□ -0.87
CSTF3-208ENST00000528865 BCAMP50895 628 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 FAM193AP78312 1265 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 PPARAQ07869 468 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 FUT2Q10981 343 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 NR1I3Q14994 352 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 POSTNQ15063 836 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 CCDC152Q4G0S7 254 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 ISM2Q6H9L7 571 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 SYT10Q6XYQ8 523 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 ZNF654Q8IZM8 581 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 CDC5LQ99459 802 aaKnown RBP9.6□□□□□ -0.87
CSTF3-208ENST00000528865 MPHOSPH8Q99549 860 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 ARID3AQ99856 593 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 CDCA7Q9BWT1 371 aaPredicted RBP9.6□□□□□ -0.87
CSTF3-208ENST00000528865 SEC31BQ9NQW1 1179 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 SERTAD1Q9UHV2 236 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 BCORQ6W2J9 1755 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 NHSL1Q5SYE7 1610 aa9.6□□□□□ -0.87
CSTF3-208ENST00000528865 TMEM232C9JQI7 657 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 FOXN1O15353 648 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 STX10O60499 249 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 KIF20AO95235 890 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 NTSR2O95665 410 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 BMP15O95972 392 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 IGHMBP2P38935 993 aaKnown RBP9.59□□□□□ -0.87
CSTF3-208ENST00000528865 TDO2P48775 406 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 GRIN1Q05586 938 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 PKN1Q16512 942 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 CFAP100Q494V2 611 aa9.59□□□□□ -0.87
CSTF3-208ENST00000528865 SMARCE1Q969G3 411 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms