RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 VPS72Q15906 364 aa11.35□□□□□ -0.59
COMMD9-205ENST00000528608 COL13A1Q5TAT6 717 aaPredicted RBP11.35□□□□□ -0.59
COMMD9-205ENST00000528608 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
COMMD9-205ENST00000528608 SRA1Q9HD15 236 aaKnown RBP11.35□□□□□ -0.59
COMMD9-205ENST00000528608 GLI3P10071 1580 aa11.35□□□□□ -0.59
COMMD9-205ENST00000528608 LMO7Q8WWI1 1683 aa11.35□□□□□ -0.59
COMMD9-205ENST00000528608 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
COMMD9-205ENST00000528608 CCDC7Q96M83 1385 aa11.34□□□□□ -0.59
COMMD9-205ENST00000528608 DLL1O00548 723 aa11.34□□□□□ -0.59
COMMD9-205ENST00000528608 ATP11AP98196 1134 aa11.34□□□□□ -0.59
COMMD9-205ENST00000528608 PRSS36Q5K4E3 855 aa11.34□□□□□ -0.59
COMMD9-205ENST00000528608 CACTIN-AS1Q8N1I8 211 aa11.34□□□□□ -0.59
COMMD9-205ENST00000528608 AATKQ6ZMQ8 1374 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 SMNDC1O75940 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
COMMD9-205ENST00000528608 NOS3P29474 1203 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 PDE12Q6L8Q7 609 aaKnown RBP11.33□□□□□ -0.6
COMMD9-205ENST00000528608 ZNF438Q7Z4V0 828 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 EDEM1Q92611 657 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 COG3Q96JB2 828 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 MUC3BQ9H195 1237 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 RGPD5Q99666 1765 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 RGS12O14924 1447 aa11.33□□□□□ -0.6
COMMD9-205ENST00000528608 KIF20BQ96Q89 1820 aa11.32□□□□□ -0.6
COMMD9-205ENST00000528608 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
COMMD9-205ENST00000528608 RPLP1P05386 114 aaKnown RBP11.32□□□□□ -0.6
COMMD9-205ENST00000528608 PCSK2P16519 638 aa11.32□□□□□ -0.6
COMMD9-205ENST00000528608 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
COMMD9-205ENST00000528608 LACRTQ9GZZ8 138 aa11.32□□□□□ -0.6
COMMD9-205ENST00000528608 ELP3Q9H9T3 547 aa11.32□□□□□ -0.6
COMMD9-205ENST00000528608 CCDC9Q9Y3X0 531 aaKnown RBP11.32□□□□□ -0.6
COMMD9-205ENST00000528608 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
COMMD9-205ENST00000528608 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
COMMD9-205ENST00000528608 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
COMMD9-205ENST00000528608 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
COMMD9-205ENST00000528608 EVA1CP58658 441 aa11.31□□□□□ -0.6
COMMD9-205ENST00000528608 DNM1Q05193 864 aaKnown RBP11.31□□□□□ -0.6
COMMD9-205ENST00000528608 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
COMMD9-205ENST00000528608 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
COMMD9-205ENST00000528608 TTC16Q8NEE8 873 aa11.31□□□□□ -0.6
COMMD9-205ENST00000528608 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
COMMD9-205ENST00000528608 MRPL18Q9H0U6 180 aaKnown RBP11.31□□□□□ -0.6
COMMD9-205ENST00000528608 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
COMMD9-205ENST00000528608 TMEM63CQ9P1W3 806 aa11.31□□□□□ -0.6
COMMD9-205ENST00000528608 PPME1Q9Y570 386 aa11.31□□□□□ -0.6
COMMD9-205ENST00000528608 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
COMMD9-205ENST00000528608 LTN1O94822 1766 aa11.31□□□□□ -0.6
COMMD9-205ENST00000528608 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
COMMD9-205ENST00000528608 KIF4AO95239 1232 aa11.3□□□□□ -0.6
COMMD9-205ENST00000528608 SETDB1Q15047 1291 aa11.3□□□□□ -0.6
COMMD9-205ENST00000528608 RRS1Q15050 365 aaKnown RBP11.3□□□□□ -0.6
COMMD9-205ENST00000528608 RASSF4Q9H2L5 321 aa11.3□□□□□ -0.6
COMMD9-205ENST00000528608 AKTIPQ9H8T0 292 aa11.3□□□□□ -0.6
COMMD9-205ENST00000528608 MAP3K19Q56UN5 1328 aa11.3□□□□□ -0.6
COMMD9-205ENST00000528608 SPATA31A1Q5TZJ5 1347 aa11.3□□□□□ -0.6
COMMD9-205ENST00000528608 MPSTP25325 297 aa11.29□□□□□ -0.6
COMMD9-205ENST00000528608 SSFA2P28290 1259 aa11.29□□□□□ -0.6
COMMD9-205ENST00000528608 MEGF10Q96KG7 1140 aa11.29□□□□□ -0.6
COMMD9-205ENST00000528608 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
COMMD9-205ENST00000528608 KANSL3Q9P2N6 904 aa11.29□□□□□ -0.6
COMMD9-205ENST00000528608 CGNL1Q0VF96 1302 aa11.29□□□□□ -0.6
COMMD9-205ENST00000528608 CDC27P30260 824 aa11.28□□□□□ -0.6
COMMD9-205ENST00000528608 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
COMMD9-205ENST00000528608 FAM177BA6PVY3 158 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 LINC01387J3KSC0 135 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 PDGFAP04085 211 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 HOXC9P31274 260 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.61
COMMD9-205ENST00000528608 EIF1AXP47813 144 aaKnown RBP11.27□□□□□ -0.61
COMMD9-205ENST00000528608 C8orf34Q49A92 452 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 TXNDC11Q6PKC3 985 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 IP6K1Q92551 441 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 MTMR7Q9Y216 660 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 WDR17Q8IZU2 1322 aa11.27□□□□□ -0.61
COMMD9-205ENST00000528608 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 MZF1P28698 734 aaPredicted RBP11.26□□□□□ -0.61
COMMD9-205ENST00000528608 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
COMMD9-205ENST00000528608 MTMR3Q13615 1198 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
COMMD9-205ENST00000528608 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
COMMD9-205ENST00000528608 TOM1L2Q6ZVM7 507 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 PBX4Q9BYU1 374 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 CNTN3Q9P232 1028 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 CRB1P82279 1406 aa11.26□□□□□ -0.61
COMMD9-205ENST00000528608 ABCC6O95255 1503 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 F8W735 103 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-205ENST00000528608 ALX3O95076 343 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 CDC25BP30305 580 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 AMPHP49418 695 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 AAMPQ13685 434 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 ALKBH2Q6NS38 261 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 TMEM130Q8N3G9 435 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 TCP11L2Q8N4U5 519 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 CEP120Q8N960 986 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
COMMD9-205ENST00000528608 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-205ENST00000528608 MAP2P11137 1827 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms