RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-215ENST00000528396 CETPP11597 493 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 GJA5P36382 358 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 SMC5Q8IY18 1101 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 SCYL3Q8IZE3 742 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
CAPN1-215ENST00000528396 FSD1Q9BTV5 496 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
CAPN1-215ENST00000528396 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
CAPN1-215ENST00000528396 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
CAPN1-215ENST00000528396 IGHDP01880 384 aa16.12■□□□□ 0.17
CAPN1-215ENST00000528396 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-215ENST00000528396 MAP3K10Q02779 954 aa16.12■□□□□ 0.17
CAPN1-215ENST00000528396 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
CAPN1-215ENST00000528396 FOXP4Q8IVH2 680 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-215ENST00000528396 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
CAPN1-215ENST00000528396 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
CAPN1-215ENST00000528396 IRF6O14896 467 aa16.11■□□□□ 0.17
CAPN1-215ENST00000528396 RNF113AO15541 343 aaKnown RBP16.11■□□□□ 0.17
CAPN1-215ENST00000528396 TNS4Q8IZW8 715 aa16.11■□□□□ 0.17
CAPN1-215ENST00000528396 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
CAPN1-215ENST00000528396 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
CAPN1-215ENST00000528396 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
CAPN1-215ENST00000528396 CAPN15O75808 1086 aa16.1■□□□□ 0.17
CAPN1-215ENST00000528396 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
CAPN1-215ENST00000528396 PDE1AP54750 535 aa16.1■□□□□ 0.17
CAPN1-215ENST00000528396 NUCB1Q02818 461 aa16.1■□□□□ 0.17
CAPN1-215ENST00000528396 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
CAPN1-215ENST00000528396 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
CAPN1-215ENST00000528396 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
CAPN1-215ENST00000528396 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-215ENST00000528396 IGF2BP3O00425 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
CAPN1-215ENST00000528396 PTPRAP18433 802 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 APPBP2Q92624 585 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 MS4A4AQ96JQ5 239 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 CDK5RAP2Q96SN8 1893 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 MYH7P12883 1935 aa16.09■□□□□ 0.17
CAPN1-215ENST00000528396 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
CAPN1-215ENST00000528396 TRIM6-TRIM34B2RNG4 842 aa16.08■□□□□ 0.16
CAPN1-215ENST00000528396 CXCL11O14625 94 aa16.08■□□□□ 0.16
CAPN1-215ENST00000528396 CAP2P40123 477 aa16.08■□□□□ 0.16
CAPN1-215ENST00000528396 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
CAPN1-215ENST00000528396 EHD4Q9H223 541 aa16.08■□□□□ 0.16
CAPN1-215ENST00000528396 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-215ENST00000528396 MYH1P12882 1939 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 PRKAB2O43741 272 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 CHGBP05060 677 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 TAF1CQ15572 869 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-215ENST00000528396 FASTKD5Q7L8L6 764 aaKnown RBP16.07■□□□□ 0.16
CAPN1-215ENST00000528396 EVI5LQ96CN4 794 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 PTPN18Q99952 460 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 TBC1D2Q9BYX2 928 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 ZFYVE28Q9HCC9 887 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 DOCK1Q14185 1865 aa16.07■□□□□ 0.16
CAPN1-215ENST00000528396 NAV1Q8NEY1 1877 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 GPR25O00155 361 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 GDF11O95390 407 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 APPP05067 770 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 ASNSP08243 561 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 GNAT2P19087 354 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 CRHR2Q13324 411 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
CAPN1-215ENST00000528396 GPAA1O43292 621 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 SLC34A2O95436 690 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 PLCD1P51178 756 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-215ENST00000528396 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-215ENST00000528396 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
CAPN1-215ENST00000528396 FAM43AQ8N2R8 423 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 ZNF280CQ8ND82 737 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-215ENST00000528396 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 ZCCHC17Q9NP64 241 aaKnown RBP16.05■□□□□ 0.16
CAPN1-215ENST00000528396 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-215ENST00000528396 AFG3L2Q9Y4W6 797 aa16.05■□□□□ 0.16
CAPN1-215ENST00000528396 CASP8AP2Q9UKL3 1982 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 BTBD19C9JJ37 291 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
CAPN1-215ENST00000528396 FKTNO75072 461 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 NEFLP07196 543 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 TDO2P48775 406 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 SPP2Q13103 211 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 ANKRD23Q86SG2 305 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 OSBP2Q969R2 916 aa16.04■□□□□ 0.16
CAPN1-215ENST00000528396 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms