RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PSMC4P43686 418 aa17.31■□□□□ 0.36
CAPN1-212ENST00000527887 MAP3K12Q12852 859 aa17.31■□□□□ 0.36
CAPN1-212ENST00000527887 AACSQ86V21 672 aa17.31■□□□□ 0.36
CAPN1-212ENST00000527887 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
CAPN1-212ENST00000527887 PROCA1Q8NCQ7 364 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-212ENST00000527887 RHPN1Q8TCX5 695 aa17.31■□□□□ 0.36
CAPN1-212ENST00000527887 KIF1BPQ96EK5 621 aa17.31■□□□□ 0.36
CAPN1-212ENST00000527887 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
CAPN1-212ENST00000527887 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 RAB11FIP3O75154 756 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-212ENST00000527887 BCRP11274 1271 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-212ENST00000527887 GADL1Q6ZQY3 521 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 ZNF280CQ8ND82 737 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 TGFBRAP1Q8WUH2 860 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 AS3MTQ9HBK9 375 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 PIH1D3Q9NQM4 214 aaKnown RBP17.3■□□□□ 0.36
CAPN1-212ENST00000527887 TLR7Q9NYK1 1049 aaKnown RBP17.3■□□□□ 0.36
CAPN1-212ENST00000527887 SRRDQ9UH36 339 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 PNMA3Q9UL41 463 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
CAPN1-212ENST00000527887 FLT1P17948 1338 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 TRIM75PA6NK02 468 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 IDH1O75874 414 aaKnown RBP17.29■□□□□ 0.36
CAPN1-212ENST00000527887 ASNSP08243 561 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 CYP7A1P22680 504 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAPN1-212ENST00000527887 PDE3AQ14432 1141 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 PRPF38BQ5VTL8 546 aaKnown RBP17.29■□□□□ 0.36
CAPN1-212ENST00000527887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAPN1-212ENST00000527887 ARHGAP39Q9C0H5 1083 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 COG6Q9Y2V7 657 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 CENPFP49454 3210 aa17.29■□□□□ 0.36
CAPN1-212ENST00000527887 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 POTEFA5A3E0 1075 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 HLA-DOAP06340 250 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 CYP2C8P10632 490 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 FCGRTP55899 365 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 SPP2Q13103 211 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 SH3D19Q5HYK7 790 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 ADGRA1Q86SQ6 560 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 MAPKAPK5Q8IW41 473 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 TRIM47Q96LD4 638 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 WDR18Q9BV38 432 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 TRIM34Q9BYJ4 488 aa17.28■□□□□ 0.36
CAPN1-212ENST00000527887 FAM196BA6NMK8 535 aa17.27■□□□□ 0.36
CAPN1-212ENST00000527887 OSBPP22059 807 aa17.27■□□□□ 0.36
CAPN1-212ENST00000527887 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-212ENST00000527887 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-212ENST00000527887 PDE4DIPQ5VU43 2346 aa17.27■□□□□ 0.35
CAPN1-212ENST00000527887 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
CAPN1-212ENST00000527887 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
CAPN1-212ENST00000527887 RAET1EQ8TD07 263 aa17.26■□□□□ 0.35
CAPN1-212ENST00000527887 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
CAPN1-212ENST00000527887 C19orf81C9J6K1 198 aa17.25■□□□□ 0.35
CAPN1-212ENST00000527887 CTGFP29279 349 aa17.25■□□□□ 0.35
CAPN1-212ENST00000527887 USP5P45974 858 aa17.25■□□□□ 0.35
CAPN1-212ENST00000527887 GCLCP48506 637 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-212ENST00000527887 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
CAPN1-212ENST00000527887 TTC6Q86TZ1 520 aa17.25■□□□□ 0.35
CAPN1-212ENST00000527887 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CAPN1-212ENST00000527887 PALD1Q9ULE6 856 aa17.25■□□□□ 0.35
CAPN1-212ENST00000527887 MYPNQ86TC9 1320 aa17.24■□□□□ 0.35
CAPN1-212ENST00000527887 CAPN2P17655 700 aa17.24■□□□□ 0.35
CAPN1-212ENST00000527887 EN2P19622 333 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-212ENST00000527887 GRK4P32298 578 aa17.24■□□□□ 0.35
CAPN1-212ENST00000527887 DYNLL1P63167 89 aaKnown RBP17.24■□□□□ 0.35
CAPN1-212ENST00000527887 RRP1BQ14684 758 aaKnown RBP17.24■□□□□ 0.35
CAPN1-212ENST00000527887 SH3TC2Q8TF17 1288 aa17.24■□□□□ 0.35
CAPN1-212ENST00000527887 EHD4Q9H223 541 aa17.24■□□□□ 0.35
CAPN1-212ENST00000527887 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
CAPN1-212ENST00000527887 HMGCS2P54868 508 aa17.23■□□□□ 0.35
CAPN1-212ENST00000527887 BACE1P56817 501 aa17.23■□□□□ 0.35
CAPN1-212ENST00000527887 FAM110CQ1W6H9 321 aa17.23■□□□□ 0.35
CAPN1-212ENST00000527887 CCDC84Q86UT8 332 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-212ENST00000527887 SLAIN1Q8ND83 568 aa17.23■□□□□ 0.35
CAPN1-212ENST00000527887 NKX2-3Q8TAU0 364 aa17.23■□□□□ 0.35
CAPN1-212ENST00000527887 TMOD4Q9NZQ9 345 aa17.23■□□□□ 0.35
CAPN1-212ENST00000527887 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-212ENST00000527887 MAST2Q6P0Q8 1798 aa17.23■□□□□ 0.35
CAPN1-212ENST00000527887 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-212ENST00000527887 UBXN2AP68543 259 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 IRF5Q13568 498 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 TREML2Q5T2D2 321 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 TATDN1Q6P1N9 297 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 MIGA1Q8NAN2 632 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 DNAJC18Q9H819 358 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 SERPINB13Q9UIV8 391 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
CAPN1-212ENST00000527887 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.35
CAPN1-212ENST00000527887 USP17L10C9JJH3 530 aa17.21■□□□□ 0.35
CAPN1-212ENST00000527887 TNPO2O14787 897 aaKnown RBP17.21■□□□□ 0.35
CAPN1-212ENST00000527887 PRKCZQ05513 592 aa17.21■□□□□ 0.35
CAPN1-212ENST00000527887 ANKRD13CQ8N6S4 541 aa17.21■□□□□ 0.35
CAPN1-212ENST00000527887 PXYLP1Q8TE99 480 aa17.21■□□□□ 0.35
CAPN1-212ENST00000527887 COA7Q96BR5 231 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms