RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 MCOLN1Q9GZU1 580 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 PAG1Q9NWQ8 432 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 CHGBP05060 677 aa13.5□□□□□ -0.25
SNRNP35-203ENST00000526639 CRHR2Q13324 411 aa13.5□□□□□ -0.25
SNRNP35-203ENST00000526639 PPIL2Q13356 520 aa13.5□□□□□ -0.25
SNRNP35-203ENST00000526639 SNAPC2Q13487 334 aa13.5□□□□□ -0.25
SNRNP35-203ENST00000526639 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
SNRNP35-203ENST00000526639 SAP30BPQ9UHR5 308 aaKnown RBP13.5□□□□□ -0.25
SNRNP35-203ENST00000526639 ZHX2Q9Y6X8 837 aa13.5□□□□□ -0.25
SNRNP35-203ENST00000526639 ZNF532Q9HCE3 1301 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 IGSF3O75054 1194 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 PDE6AP16499 860 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 NOL9Q5SY16 702 aaKnown RBP13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 SCYL3Q8IZE3 742 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 CFHR5Q9BXR6 569 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 CETPP11597 493 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 USP5P45974 858 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 HAUS7Q99871 368 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 PI4KBQ9UBF8 816 aa13.49□□□□□ -0.25
SNRNP35-203ENST00000526639 LAMB1P07942 1786 aa13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 TBC1D12O60347 775 aa13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 CTNND1O60716 968 aaKnown RBP13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 PTPRAP18433 802 aa13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 AAMPQ13685 434 aa13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 RRP1BQ14684 758 aaKnown RBP13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 DHX36Q9H2U1 1008 aaKnown RBP13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 CDK5RAP2Q96SN8 1893 aa13.48□□□□□ -0.25
SNRNP35-203ENST00000526639 MAGEB6P1A0A0J9YX57 407 aa13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 FKTNO75072 461 aa13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 TAF1CQ15572 869 aaPredicted RBP13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 BRCA2P51587 3418 aa13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 HTTP42858 3142 aa13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 CRACR2BQ8N4Y2 399 aaPredicted RBP13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 DNAJC18Q9H819 358 aa13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 KCNH4Q9UQ05 1017 aa13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 COL2A1P02458 1487 aaPredicted RBP13.47□□□□□ -0.25
SNRNP35-203ENST00000526639 TRIM75PA6NK02 468 aa13.46□□□□□ -0.25
SNRNP35-203ENST00000526639 CTU1Q7Z7A3 348 aaKnown RBP13.46□□□□□ -0.25
SNRNP35-203ENST00000526639 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
SNRNP35-203ENST00000526639 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
SNRNP35-203ENST00000526639 AFG3L2Q9Y4W6 797 aa13.46□□□□□ -0.25
SNRNP35-203ENST00000526639 FOCADQ5VW36 1801 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 CCDC85CA6NKD9 419 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 ADD2P35612 726 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 CAP2P40123 477 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 NOM1Q5C9Z4 860 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 ANKRD45Q5TZF3 282 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 CERS3Q8IU89 383 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 TRIM34Q9BYJ4 488 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 ZFYVE28Q9HCC9 887 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 HLA-DOAP06340 250 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 MOGSQ13724 837 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 TMED8Q6PL24 325 aaPredicted RBP13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 FOXP4Q8IVH2 680 aaPredicted RBP13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNRNP35-203ENST00000526639 SIPA1L1O43166 1804 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 PDHXO00330 501 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 CXCL11O14625 94 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 GDF11O95390 407 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 PLCD1P51178 756 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 JAG1P78504 1218 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 EVX2Q03828 476 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 CD99L2Q8TCZ2 262 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 DOCK1Q14185 1865 aa13.44□□□□□ -0.26
SNRNP35-203ENST00000526639 PRKAB2O43741 272 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 CAP1Q01518 475 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 SP3Q02447 781 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 HDAC1Q13547 482 aaPredicted RBP13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 GADL1Q6ZQY3 521 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 CRNKL1Q9BZJ0 848 aaKnown RBP13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 MYH1P12882 1939 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 A0A0G2JLL6 359 aaPredicted RBP13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 TLR2O60603 784 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 MBD4O95243 580 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 CYP2C8P10632 490 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 SPP2Q13103 211 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 METTL16Q86W50 562 aaKnown RBP13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 PUS7LQ9H0K6 701 aaKnown RBP13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 MCM9Q9NXL9 1143 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 TRIM17Q9Y577 477 aa13.43□□□□□ -0.26
SNRNP35-203ENST00000526639 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-203ENST00000526639 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms