RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 WBP1LQ9NX94 342 aa20.77■□□□□ 0.92
LMX1B-203ENST00000526117 CTNND1O60716 968 aaKnown RBP20.76■□□□□ 0.91
LMX1B-203ENST00000526117 TTC6Q86TZ1 520 aa20.76■□□□□ 0.91
LMX1B-203ENST00000526117 PALD1Q9ULE6 856 aa20.76■□□□□ 0.91
LMX1B-203ENST00000526117 DOCK1Q14185 1865 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 CA12O43570 354 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 INPP5BP32019 993 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 TM4SF4P48230 202 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 INHBEP58166 350 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 KIF23Q02241 960 aaPredicted RBP20.75■□□□□ 0.91
LMX1B-203ENST00000526117 SCYL3Q8IZE3 742 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 SDR42E1Q8WUS8 393 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 ZKSCAN4Q969J2 545 aaPredicted RBP20.75■□□□□ 0.91
LMX1B-203ENST00000526117 ELP3Q9H9T3 547 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.75■□□□□ 0.91
LMX1B-203ENST00000526117 GINM1Q9NU53 330 aa20.75■□□□□ 0.91
LMX1B-203ENST00000526117 MANSC4A6NHS7 340 aaPredicted RBP20.74■□□□□ 0.91
LMX1B-203ENST00000526117 GPAA1O43292 621 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 PPATQ06203 517 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 SREBF2Q12772 1141 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 GRM1Q13255 1194 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 PPIL2Q13356 520 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 TTC22Q5TAA0 569 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 OPTNQ96CV9 577 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 ZIC5Q96T25 663 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 DNAJC18Q9H819 358 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 HELLSQ9NRZ9 838 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 SERPINB13Q9UIV8 391 aa20.74■□□□□ 0.91
LMX1B-203ENST00000526117 TESPA1A2RU30 521 aaPredicted RBP20.73■□□□□ 0.91
LMX1B-203ENST00000526117 TRIM6-TRIM34B2RNG4 842 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 GJA5P36382 358 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 GABPAQ06546 454 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 DDRGK1Q96HY6 314 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 CCDC136Q96JN2 1154 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 TBC1D2Q9BYX2 928 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 SAGE1Q9NXZ1 904 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 SAP30BPQ9UHR5 308 aaKnown RBP20.73■□□□□ 0.91
LMX1B-203ENST00000526117 SLC4A4Q9Y6R1 1079 aa20.73■□□□□ 0.91
LMX1B-203ENST00000526117 M0R2C6 588 aa20.72■□□□□ 0.91
LMX1B-203ENST00000526117 HIP1O00291 1037 aa20.72■□□□□ 0.91
LMX1B-203ENST00000526117 PRKAB2O43741 272 aa20.72■□□□□ 0.91
LMX1B-203ENST00000526117 IFFO2Q5TF58 517 aa20.72■□□□□ 0.91
LMX1B-203ENST00000526117 TATDN1Q6P1N9 297 aa20.72■□□□□ 0.91
LMX1B-203ENST00000526117 CRACR2BQ8N4Y2 399 aaPredicted RBP20.72■□□□□ 0.91
LMX1B-203ENST00000526117 MCM9Q9NXL9 1143 aa20.72■□□□□ 0.91
LMX1B-203ENST00000526117 GSG1L2A8MUP6 293 aa20.71■□□□□ 0.91
LMX1B-203ENST00000526117 GSPT1P15170 499 aaKnown RBP20.71■□□□□ 0.91
LMX1B-203ENST00000526117 CAP2P40123 477 aa20.71■□□□□ 0.91
LMX1B-203ENST00000526117 PLCD1P51178 756 aa20.71■□□□□ 0.91
LMX1B-203ENST00000526117 SBK1Q52WX2 424 aa20.71■□□□□ 0.91
LMX1B-203ENST00000526117 MS4A4AQ96JQ5 239 aa20.71■□□□□ 0.91
LMX1B-203ENST00000526117 ARPP21Q9UBL0 812 aaPredicted RBP20.71■□□□□ 0.91
LMX1B-203ENST00000526117 KCNH4Q9UQ05 1017 aa20.71■□□□□ 0.91
LMX1B-203ENST00000526117 ATAD5Q96QE3 1844 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 PATL2C9JE40 543 aaKnown RBP20.7■□□□□ 0.9
LMX1B-203ENST00000526117 POLR3DP05423 398 aaPredicted RBP20.7■□□□□ 0.9
LMX1B-203ENST00000526117 HSPA1AP0DMV8 641 aaKnown RBP20.7■□□□□ 0.9
LMX1B-203ENST00000526117 HSPA1BP0DMV9 641 aaKnown RBP20.7■□□□□ 0.9
LMX1B-203ENST00000526117 PTPRAP18433 802 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 SDSP20132 328 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 GTF2A2P52657 109 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 C12orf60Q5U649 245 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 AMOTL1Q8IY63 956 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 RILPL2Q969X0 211 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 SEC62Q99442 399 aaKnown RBP20.7■□□□□ 0.9
LMX1B-203ENST00000526117 CFHR5Q9BXR6 569 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 TRIM34Q9BYJ4 488 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 PICK1Q9NRD5 415 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 ROBO3Q96MS0 1386 aa20.7■□□□□ 0.9
LMX1B-203ENST00000526117 PHIPQ8WWQ0 1821 aa20.69■□□□□ 0.9
LMX1B-203ENST00000526117 FAM196BA6NMK8 535 aa20.69■□□□□ 0.9
LMX1B-203ENST00000526117 SLURP2P0DP57 97 aa20.69■□□□□ 0.9
LMX1B-203ENST00000526117 CNKSR2Q8WXI2 1034 aa20.69■□□□□ 0.9
LMX1B-203ENST00000526117 OTUD5Q96G74 571 aa20.69■□□□□ 0.9
LMX1B-203ENST00000526117 BEGAINQ9BUH8 593 aa20.69■□□□□ 0.9
LMX1B-203ENST00000526117 SWAP70Q9UH65 585 aa20.69■□□□□ 0.9
LMX1B-203ENST00000526117 CXCL11O14625 94 aa20.68■□□□□ 0.9
LMX1B-203ENST00000526117 IRF6O14896 467 aa20.68■□□□□ 0.9
LMX1B-203ENST00000526117 ASNSP08243 561 aa20.68■□□□□ 0.9
LMX1B-203ENST00000526117 MCMDC2Q4G0Z9 681 aa20.68■□□□□ 0.9
LMX1B-203ENST00000526117 CTR9Q6PD62 1173 aa20.68■□□□□ 0.9
LMX1B-203ENST00000526117 ZCCHC17Q9NP64 241 aaKnown RBP20.68■□□□□ 0.9
LMX1B-203ENST00000526117 PPP4R2Q9NY27 417 aa20.68■□□□□ 0.9
LMX1B-203ENST00000526117 BAZ2AQ9UIF9 1905 aaKnown RBP20.68■□□□□ 0.9
LMX1B-203ENST00000526117 A0A0D9SFI3 127 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 USP17L12C9JPN9 530 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 USP17L21D6R901 530 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 ALDH1A1P00352 501 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 MFAP1P55081 439 aaKnown RBP20.67■□□□□ 0.9
LMX1B-203ENST00000526117 SNAPC2Q13487 334 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 RRP1BQ14684 758 aaKnown RBP20.67■□□□□ 0.9
LMX1B-203ENST00000526117 FAM227BQ96M60 508 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 NACAP1Q9BZK3 213 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 EPB41L4AQ9HCS5 686 aaPredicted RBP20.67■□□□□ 0.9
LMX1B-203ENST00000526117 AFG3L2Q9Y4W6 797 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 ZMYM6O95789 1325 aa20.67■□□□□ 0.9
LMX1B-203ENST00000526117 FOXP2O15409 715 aa20.66■□□□□ 0.9
LMX1B-203ENST00000526117 CETPP11597 493 aa20.66■□□□□ 0.9
LMX1B-203ENST00000526117 SHMT1P34896 483 aa20.66■□□□□ 0.9
LMX1B-203ENST00000526117 MKRN3Q13064 507 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms