RNA–Protein interactions for RNA: ENST00000525576.1

NXF1-202, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-202ENST00000525576 ZKSCAN4Q969J2 545 aaPredicted RBP13.73□□□□□ -0.21
NXF1-202ENST00000525576 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
NXF1-202ENST00000525576 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
NXF1-202ENST00000525576 PUS7LQ9H0K6 701 aaKnown RBP13.73□□□□□ -0.21
NXF1-202ENST00000525576 EHD4Q9H223 541 aa13.73□□□□□ -0.21
NXF1-202ENST00000525576 ARMT1Q9H993 441 aa13.73□□□□□ -0.21
NXF1-202ENST00000525576 ELP3Q9H9T3 547 aa13.73□□□□□ -0.21
NXF1-202ENST00000525576 PALD1Q9ULE6 856 aa13.73□□□□□ -0.21
NXF1-202ENST00000525576 SNCAIPQ9Y6H5 919 aa13.73□□□□□ -0.21
NXF1-202ENST00000525576 HSPA1AP0DMV8 641 aaKnown RBP13.72□□□□□ -0.21
NXF1-202ENST00000525576 HSPA1BP0DMV9 641 aaKnown RBP13.72□□□□□ -0.21
NXF1-202ENST00000525576 GNAT2P19087 354 aa13.72□□□□□ -0.21
NXF1-202ENST00000525576 INPP5BP32019 993 aa13.72□□□□□ -0.21
NXF1-202ENST00000525576 PPATQ06203 517 aa13.72□□□□□ -0.21
NXF1-202ENST00000525576 CENPQQ7L2Z9 268 aaPredicted RBP13.72□□□□□ -0.21
NXF1-202ENST00000525576 OPTNQ96CV9 577 aa13.72□□□□□ -0.21
NXF1-202ENST00000525576 ZIC5Q96T25 663 aa13.72□□□□□ -0.21
NXF1-202ENST00000525576 DCP1AQ9NPI6 582 aaPredicted RBP13.72□□□□□ -0.21
NXF1-202ENST00000525576 SLFNL1Q499Z3 407 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 ZMYM1Q5SVZ6 1142 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 SCYL3Q8IZE3 742 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 CRACR2BQ8N4Y2 399 aaPredicted RBP13.71□□□□□ -0.21
NXF1-202ENST00000525576 OSBP2Q969R2 916 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 STRBPQ96SI9 672 aaKnown RBP13.71□□□□□ -0.21
NXF1-202ENST00000525576 PICK1Q9NRD5 415 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 GINM1Q9NU53 330 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 MCM9Q9NXL9 1143 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 SAGE1Q9NXZ1 904 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 SAP30BPQ9UHR5 308 aaKnown RBP13.71□□□□□ -0.21
NXF1-202ENST00000525576 SERPINB13Q9UIV8 391 aa13.71□□□□□ -0.21
NXF1-202ENST00000525576 NAV1Q8NEY1 1877 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 CHGBP05060 677 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 POLR3DP05423 398 aaPredicted RBP13.7□□□□□ -0.22
NXF1-202ENST00000525576 GTF2A2P52657 109 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 PPIL2Q13356 520 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 SLC4A4Q9Y6R1 1079 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 DOCK1Q14185 1865 aa13.7□□□□□ -0.22
NXF1-202ENST00000525576 TESPA1A2RU30 521 aaPredicted RBP13.69□□□□□ -0.22
NXF1-202ENST00000525576 GPAA1O43292 621 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 ALDH1A1P00352 501 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 PDE4AP27815 886 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 GJA5P36382 358 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 CAP2P40123 477 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 CTCFP49711 727 aaPredicted RBP13.69□□□□□ -0.22
NXF1-202ENST00000525576 MKRN3Q13064 507 aaKnown RBP13.69□□□□□ -0.22
NXF1-202ENST00000525576 SNAPC2Q13487 334 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 OTUD7BQ6GQQ9 843 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 RILPL2Q969X0 211 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
NXF1-202ENST00000525576 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
NXF1-202ENST00000525576 DDX60LQ5H9U9 1706 aaKnown RBP13.69□□□□□ -0.22
NXF1-202ENST00000525576 PATL2C9JE40 543 aaKnown RBP13.68□□□□□ -0.22
NXF1-202ENST00000525576 HIP1O00291 1037 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 CXCL11O14625 94 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 IRF6O14896 467 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 FOXN1O15353 648 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 TNRC18O15417 2968 aaPredicted RBP13.68□□□□□ -0.22
NXF1-202ENST00000525576 PRKAB2O43741 272 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 ASNSP08243 561 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 CETPP11597 493 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 PTPRAP18433 802 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 PLCD1P51178 756 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 CCDC136Q96JN2 1154 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 RNF186Q9NXI6 227 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
NXF1-202ENST00000525576 SWAP70Q9UH65 585 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 KCNH4Q9UQ05 1017 aa13.68□□□□□ -0.22
NXF1-202ENST00000525576 BAZ2AQ9UIF9 1905 aaKnown RBP13.68□□□□□ -0.22
NXF1-202ENST00000525576 FAM196BA6NMK8 535 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 GSG1L2A8MUP6 293 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 M0R2C6 588 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 GABPAQ06546 454 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 SBK1Q52WX2 424 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 CFHR5Q9BXR6 569 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 NACAP1Q9BZK3 213 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 ZCCHC17Q9NP64 241 aaKnown RBP13.67□□□□□ -0.22
NXF1-202ENST00000525576 ZHX2Q9Y6X8 837 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 ATAD5Q96QE3 1844 aa13.67□□□□□ -0.22
NXF1-202ENST00000525576 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
NXF1-202ENST00000525576 USP17L12C9JPN9 530 aa13.66□□□□□ -0.22
NXF1-202ENST00000525576 USP17L21D6R901 530 aa13.66□□□□□ -0.22
NXF1-202ENST00000525576 APPP05067 770 aa13.66□□□□□ -0.22
NXF1-202ENST00000525576 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
NXF1-202ENST00000525576 SDSP20132 328 aa13.66□□□□□ -0.22
NXF1-202ENST00000525576 MFAP1P55081 439 aaKnown RBP13.66□□□□□ -0.22
NXF1-202ENST00000525576 MCMDC2Q4G0Z9 681 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms