RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 NFE2L3Q9Y4A8 694 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.36□□□□□ -0.91
CHD7-203ENST00000525508 ELP1O95163 1332 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 CTAGE15A4D2H0 777 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 TCP10L2B9ZVM9 353 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 CTAGE8P0CG41 777 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 EZRP15311 586 aaKnown RBP9.35□□□□□ -0.91
CHD7-203ENST00000525508 DLGAP5Q15398 846 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 ZRSR2Q15696 482 aaKnown RBP9.35□□□□□ -0.91
CHD7-203ENST00000525508 CTAGE6Q86UF2 777 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 CTAGE4Q8IX94 777 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 GPKOWQ92917 476 aaPredicted RBP eCLIP9.35□□□□□ -0.91
CHD7-203ENST00000525508 IMPG2Q9BZV3 1241 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 QTRT2Q9H974 415 aaKnown RBP9.35□□□□□ -0.91
CHD7-203ENST00000525508 LRWD1Q9UFC0 647 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 GOLGA6L9A6NEM1 432 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 PDE8BO95263 885 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 NOC4LQ9BVI4 516 aaKnown RBP9.35□□□□□ -0.91
CHD7-203ENST00000525508 SRRTQ9BXP5 876 aaKnown RBP9.35□□□□□ -0.91
CHD7-203ENST00000525508 CBX8Q9HC52 389 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 LMBRD1Q9NUN5 540 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 ACTN2P35609 894 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 SPICE1Q8N0Z3 855 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 CSGALNACT2Q8N6G5 542 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 IGSF22Q8N9C0 903 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 PICK1Q9NRD5 415 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 TNKSO95271 1327 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 TLDC2A0PJX2 215 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 SIRT2Q8IXJ6 389 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 GPR101Q96P66 508 aaPredicted RBP9.35□□□□□ -0.91
CHD7-203ENST00000525508 TAB2Q9NYJ8 693 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 SRP68Q9UHB9 627 aaKnown RBP9.35□□□□□ -0.91
CHD7-203ENST00000525508 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
CHD7-203ENST00000525508 COBLO75128 1261 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 TACC1O75410 805 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 PAIP2Q9BPZ3 127 aaKnown RBP9.34□□□□□ -0.91
CHD7-203ENST00000525508 PLEKHA4Q9H4M7 779 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 COMMD10Q9Y6G5 202 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 ERBB3P21860 1342 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 GOLGA6L7A0A1B0GV03 622 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 PRKAB2O43741 272 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 HS1BP3Q53T59 392 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 CCDC122Q5T0U0 273 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 GIGYF2Q6Y7W6 1299 aaKnown RBP9.34□□□□□ -0.91
CHD7-203ENST00000525508 CLIC6Q96NY7 704 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 KRT86O43790 486 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 NR1I2O75469 434 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 PCCAP05165 728 aaPredicted RBP9.34□□□□□ -0.91
CHD7-203ENST00000525508 PNOCQ13519 176 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 NONOQ15233 471 aaKnown RBP eCLIP9.34□□□□□ -0.91
CHD7-203ENST00000525508 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
CHD7-203ENST00000525508 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 CCDC25Q86WR0 208 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 ARFGAP3Q9NP61 516 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 SERPINA10Q9UK55 444 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 PAXBP1Q9Y5B6 917 aa9.34□□□□□ -0.91
CHD7-203ENST00000525508 SHTN1A0MZ66 631 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 CLRN2A0PK11 232 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 CYP21A2P08686 494 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 DYNLL1P63167 89 aaKnown RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 PTPN21Q16825 1174 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 MYSM1Q5VVJ2 828 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 CCDC50Q8IVM0 306 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 SMAP1Q8IYB5 467 aaPredicted RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 GTF3C6Q969F1 213 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 MPHOSPH6Q99547 160 aaKnown RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 BAG1Q99933 345 aaPredicted RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 ARHGEF10LQ9HCE6 1279 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 MAP3K15Q6ZN16 1313 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 ERVK-7P63135 1459 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 CYP2D7A0A087X1C5 515 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 CTAGE9A4FU28 777 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 SMCO2A6NFE2 343 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 INF2Q27J81 1249 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 PNMA1Q8ND90 353 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 PIGBQ92521 554 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 TAOK3Q9H2K8 898 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 IGSF1Q8N6C5 1336 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 BLMP54132 1417 aaPredicted RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 BICDL2A1A5D9 508 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 FANCCQ00597 558 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 PTPROQ16827 1216 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 HAUS7Q99871 368 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 FTOQ9C0B1 505 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHD7-203ENST00000525508 DBNDD1Q9H9R9 158 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 KDRP35968 1356 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 FSD2A1L4K1 749 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 BRD1O95696 1058 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 REXO1Q8N1G1 1221 aaKnown RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 FANCBQ8NB91 859 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 TEKT1Q969V4 418 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 LLPHQ9BRT6 129 aaKnown RBP9.33□□□□□ -0.92
CHD7-203ENST00000525508 CALCOCO1Q9P1Z2 691 aa9.33□□□□□ -0.92
CHD7-203ENST00000525508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms