RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 PALD1Q9ULE6 856 aa22.43■■□□□ 1.18
TSPAN4-215ENST00000525334 KCNH4Q9UQ05 1017 aa22.43■■□□□ 1.18
TSPAN4-215ENST00000525334 MAGEB6P1A0A0J9YX57 407 aa22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 CCDC85CA6NKD9 419 aa22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 FKTNO75072 461 aa22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 PTPRAP18433 802 aa22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 USP5P45974 858 aa22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 TSHZ3Q63HK5 1081 aa22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 GPATCH3Q96I76 525 aa22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 HERC5Q9UII4 1024 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-215ENST00000525334 ADD2P35612 726 aa22.41■■□□□ 1.18
TSPAN4-215ENST00000525334 HDAC1Q13547 482 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-215ENST00000525334 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-215ENST00000525334 ZHX2Q9Y6X8 837 aa22.41■■□□□ 1.18
TSPAN4-215ENST00000525334 MYH1P12882 1939 aa22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 BTBD19C9JJ37 291 aa22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 AAMPQ13685 434 aa22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 TAF1CQ15572 869 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 SLC4A8Q2Y0W8 1093 aa22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 SLFNL1Q499Z3 407 aa22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 DNAJC18Q9H819 358 aa22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 SUPT16HQ9Y5B9 1047 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 DDX60LQ5H9U9 1706 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-215ENST00000525334 MYH7P12883 1935 aa22.39■■□□□ 1.18
TSPAN4-215ENST00000525334 PHIPQ8WWQ0 1821 aa22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 ATAD5Q96QE3 1844 aa22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 HLA-DOAP06340 250 aa22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 RRP1BQ14684 758 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 PKN2Q16513 984 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 CCDC84Q86UT8 332 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 EXOC6Q8TAG9 804 aa22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 OTUD7AQ8TE49 926 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-215ENST00000525334 CXCL11O14625 94 aa22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 CHGBP05060 677 aa22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 CAP2P40123 477 aa22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 MOGSQ13724 837 aa22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 METTL16Q86W50 562 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 FOXP4Q8IVH2 680 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 LCORLQ8N3X6 602 aa22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 CRACR2BQ8N4Y2 399 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 CRNKL1Q9BZJ0 848 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 ZCCHC17Q9NP64 241 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 AFG3L2Q9Y4W6 797 aa22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 NAV1Q8NEY1 1877 aa22.38■■□□□ 1.17
TSPAN4-215ENST00000525334 GCC1Q96CN9 775 aa22.37■■□□□ 1.17
TSPAN4-215ENST00000525334 TRIM34Q9BYJ4 488 aa22.37■■□□□ 1.17
TSPAN4-215ENST00000525334 ZFYVE28Q9HCC9 887 aa22.37■■□□□ 1.17
TSPAN4-215ENST00000525334 TTC41PQ6P2S7 1318 aa22.36■■□□□ 1.17
TSPAN4-215ENST00000525334 A0A0G2JLL6 359 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-215ENST00000525334 UBE3CQ15386 1083 aa22.36■■□□□ 1.17
TSPAN4-215ENST00000525334 ANKRD45Q5TZF3 282 aa22.36■■□□□ 1.17
TSPAN4-215ENST00000525334 PRRT2Q7Z6L0 340 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-215ENST00000525334 ANKRD23Q86SG2 305 aa22.36■■□□□ 1.17
TSPAN4-215ENST00000525334 ARMT1Q9H993 441 aa22.36■■□□□ 1.17
TSPAN4-215ENST00000525334 PTPRFP10586 1907 aa22.35■■□□□ 1.17
TSPAN4-215ENST00000525334 MBD4O95243 580 aa22.35■■□□□ 1.17
TSPAN4-215ENST00000525334 ZSCAN25Q6NSZ9 544 aa22.35■■□□□ 1.17
TSPAN4-215ENST00000525334 TRIM75PA6NK02 468 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 PDHXO00330 501 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 MX1P20591 662 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 TTC6Q86TZ1 520 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 KBTBD3Q8NAB2 608 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 SDR42E1Q8WUS8 393 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 EHD4Q9H223 541 aa22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 ZBTB47Q9UFB7 747 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-215ENST00000525334 SALL3Q9BXA9 1300 aa22.33■■□□□ 1.17
TSPAN4-215ENST00000525334 ERC2O15083 957 aa22.33■■□□□ 1.17
TSPAN4-215ENST00000525334 JAG1P78504 1218 aa22.33■■□□□ 1.17
TSPAN4-215ENST00000525334 GPAT2Q6NUI2 795 aa22.33■■□□□ 1.17
TSPAN4-215ENST00000525334 DCP1AQ9NPI6 582 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-215ENST00000525334 SERPINB13Q9UIV8 391 aa22.33■■□□□ 1.17
TSPAN4-215ENST00000525334 PRKAB2O43741 272 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 TLR2O60603 784 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 GDF11O95390 407 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 RGS19P49795 217 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 PLCD1P51178 756 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 SP3Q02447 781 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 SHROOM1Q2M3G4 852 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 GADL1Q6ZQY3 521 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 FASTKD5Q7L8L6 764 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 CD99L2Q8TCZ2 262 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 ERO1AQ96HE7 468 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 RWDD1Q9H446 243 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 MCM9Q9NXL9 1143 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 HPS5Q9UPZ3 1129 aa22.32■■□□□ 1.16
TSPAN4-215ENST00000525334 USP17L5A8MUK1 530 aa22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 GLRX3O76003 335 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 ASNSP08243 561 aa22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 SPP2Q13103 211 aa22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 FBXO46Q6PJ61 603 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 ZNF280CQ8ND82 737 aa22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 TBC1D2Q9BYX2 928 aa22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 PUS7LQ9H0K6 701 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-215ENST00000525334 EVX2Q03828 476 aa22.3■■□□□ 1.16
TSPAN4-215ENST00000525334 TATDN1Q6P1N9 297 aa22.3■■□□□ 1.16
TSPAN4-215ENST00000525334 ZBTB21Q9ULJ3 1066 aa22.3■■□□□ 1.16
TSPAN4-215ENST00000525334 IGHDP01880 384 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms