RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SAMD5Q5TGI4 173 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 C1orf53Q5VUE5 145 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 PHLDB3Q6NSJ2 640 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 TMEM214Q6NUQ4 689 aaKnown RBP4.96□□□□□ -1.62
CSDE1-209ENST00000525132 RGMBQ6NW40 437 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 ASCL5Q7RTU5 278 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 FAM200AQ8TCP9 573 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 PIK3R5Q8WYR1 880 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 IRF7Q92985 503 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 L3MBTL2Q969R5 705 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 SLIT3O75094 1523 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 RNF123Q5XPI4 1314 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 EFSO43281 561 aa4.95□□□□□ -1.62
CSDE1-209ENST00000525132 MAGEA10P43363 369 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-209ENST00000525132 PHKA2P46019 1235 aa4.95□□□□□ -1.62
CSDE1-209ENST00000525132 FKBP5Q13451 457 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-209ENST00000525132 RUNDC1Q96C34 613 aa4.95□□□□□ -1.62
CSDE1-209ENST00000525132 MYO19Q96H55 970 aa4.95□□□□□ -1.62
CSDE1-209ENST00000525132 R3HDMLQ9H3Y0 253 aa4.95□□□□□ -1.62
CSDE1-209ENST00000525132 CCDC87Q9NVE4 849 aa4.95□□□□□ -1.62
CSDE1-209ENST00000525132 CXXC1Q9P0U4 656 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-209ENST00000525132 ZMYND8Q9ULU4 1186 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-209ENST00000525132 COL4A6Q14031 1691 aa4.95□□□□□ -1.62
CSDE1-209ENST00000525132 INSRP06213 1382 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 ANKRD30BQ9BXX2 1392 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 MYO15AQ9UKN7 3530 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 SERTM1A2A2V5 107 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 KCNQ1P51787 676 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 COL9A3Q14050 684 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-209ENST00000525132 NOM1Q5C9Z4 860 aaKnown RBP4.94□□□□□ -1.62
CSDE1-209ENST00000525132 NLRP8Q86W28 1048 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 TMEM151AQ8N4L1 468 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 SCG3Q8WXD2 468 aaKnown RBP4.94□□□□□ -1.62
CSDE1-209ENST00000525132 CABP1Q9NZU7 370 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 DMGDHQ9UI17 866 aaKnown RBP4.94□□□□□ -1.62
CSDE1-209ENST00000525132 USTQ9Y2C2 406 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 PARP3Q9Y6F1 533 aa4.94□□□□□ -1.62
CSDE1-209ENST00000525132 HELZ2Q9BYK8 2649 aaKnown RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 LGR5O75473 907 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 FAM157BP0CG42 384 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 SLURP2P0DP57 97 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 SYN1P17600 705 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 SSFA2P28290 1259 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 GRNP28799 593 aaKnown RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 ZNF157P51786 506 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 RIPPLY3P57055 190 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 LARP1BQ659C4 914 aaKnown RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 CDC42BPGQ6DT37 1551 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 SMG6Q86US8 1419 aaKnown RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 VWA5B2Q8N398 1253 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 NUCKS1Q9H1E3 243 aaKnown RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 RUBCNLQ9H714 662 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 COL2A1P02458 1487 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 PRXQ9BXM0 1461 aa4.93□□□□□ -1.62
CSDE1-209ENST00000525132 ZNF644Q9H582 1327 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-209ENST00000525132 CRYBG1Q9Y4K1 1723 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 A0A1W2PNR3 127 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 H7C1W4 665 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 PPP1R12BO60237 982 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-209ENST00000525132 TFF2Q03403 129 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 TCF15Q12870 199 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 PRKG1Q13976 671 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 LRRC41Q15345 812 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 CAPN12Q6ZSI9 719 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 SV2AQ7L0J3 742 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 MDFIQ99750 246 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 CFHR5Q9BXR6 569 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 PHACTR1Q9C0D0 580 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 GPAMQ9HCL2 828 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 LRFN2Q9ULH4 789 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 KALRNO60229 2985 aa4.92□□□□□ -1.62
CSDE1-209ENST00000525132 CARNS1A5YM72 827 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 TNFRSF10BO14763 440 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 BNIP3LO60238 219 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 CCDC85BQ15834 202 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-209ENST00000525132 RTN1Q16799 776 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 FAM26DQ5JW98 314 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 IER5Q5VY09 327 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 NBPF11Q86T75 865 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 ALDH16A1Q8IZ83 802 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 TRPM4Q8TD43 1214 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 GTPBP3Q969Y2 492 aaKnown RBP4.91□□□□□ -1.62
CSDE1-209ENST00000525132 PRIMPOLQ96LW4 560 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 GAS2L1Q99501 681 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-209ENST00000525132 ZCCHC2Q9C0B9 1178 aaKnown RBP4.91□□□□□ -1.62
CSDE1-209ENST00000525132 CD320Q9NPF0 282 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 HECTD1Q9ULT8 2610 aa4.91□□□□□ -1.62
CSDE1-209ENST00000525132 GCC2Q8IWJ2 1684 aa4.9□□□□□ -1.62
CSDE1-209ENST00000525132 DICER1Q9UPY3 1922 aaKnown RBP4.9□□□□□ -1.62
CSDE1-209ENST00000525132 A0A1B0GTL3 188 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 PRMT3O60678 531 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 TATP17735 454 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-209ENST00000525132 GTF2E1P29083 439 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-209ENST00000525132 TNP2Q05952 138 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 TYRO3Q06418 890 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 SLC9C1Q4G0N8 1177 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 LRSAM1Q6UWE0 723 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 TOM1L2Q6ZVM7 507 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 RETREG2Q8NC44 543 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms