RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 PTPN18Q99952 460 aa13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 FLT1P17948 1338 aa13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 IRF6O14896 467 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 CTNND1O60716 968 aaKnown RBP13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 IFNL1Q8IU54 200 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 FOCADQ5VW36 1801 aa13.09□□□□□ -0.31
AP001001.2-201ENST00000524966 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 IGF2BP3O00425 579 aaKnown RBP eCLIP13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 MX1P20591 662 aa13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 GTF2A2P52657 109 aa13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 PPATQ06203 517 aa13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 PPIL2Q13356 520 aa13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 RRP1BQ14684 758 aaKnown RBP13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 KBTBD3Q8NAB2 608 aa13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
AP001001.2-201ENST00000524966 LAMB1P07942 1786 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 ERC2O15083 957 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 TBC1D8O95759 1140 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 PTPRAP18433 802 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 USP5P45974 858 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 PDE1AP54750 535 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 NUCB1Q02818 461 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 B4GALNT3Q6L9W6 998 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 SCYL3Q8IZE3 742 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 BRI3BPQ8WY22 251 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 CFHR5Q9BXR6 569 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 KCNH4Q9UQ05 1017 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 MYH7P12883 1935 aa13.07□□□□□ -0.32
AP001001.2-201ENST00000524966 MYH1P12882 1939 aa13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 ALDH1A1P00352 501 aa13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 CRNKL1Q9BZJ0 848 aaKnown RBP13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 PUS7LQ9H0K6 701 aaKnown RBP13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 DNAJC18Q9H819 358 aa13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
AP001001.2-201ENST00000524966 SIPA1L1O43166 1804 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 CCL15-CCL14A0A0B4J2E2 113 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 RNF113AO15541 343 aaKnown RBP13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 PRKAB2O43741 272 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 MBD4O95243 580 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 CETPP11597 493 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 CAP2P40123 477 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 SNAPC2Q13487 334 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 CCL15Q16663 113 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 OSBP2Q969R2 916 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 DCP1AQ9NPI6 582 aaPredicted RBP13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 PICK1Q9NRD5 415 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 ZHX2Q9Y6X8 837 aa13.05□□□□□ -0.32
AP001001.2-201ENST00000524966 CXCL11O14625 94 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 ZFYP08048 801 aaPredicted RBP13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 PLCD1P51178 756 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 JAG1P78504 1218 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 MOGSQ13724 837 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 OTUD7BQ6GQQ9 843 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 EHD4Q9H223 541 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.04□□□□□ -0.32
AP001001.2-201ENST00000524966 BTBD19C9JJ37 291 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 GPR25O00155 361 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 HLA-DOAP06340 250 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 EVX2Q03828 476 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 SLC4A8Q2Y0W8 1093 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 TATDN1Q6P1N9 297 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 PLEKHM2Q8IWE5 1019 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 APPBP2Q92624 585 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 SERPINB13Q9UIV8 391 aa13.03□□□□□ -0.32
AP001001.2-201ENST00000524966 PHIPQ8WWQ0 1821 aa13.02□□□□□ -0.32
AP001001.2-201ENST00000524966 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.33
AP001001.2-201ENST00000524966 GABPAQ06546 454 aa13.02□□□□□ -0.33
AP001001.2-201ENST00000524966 CRHR2Q13324 411 aa13.02□□□□□ -0.33
AP001001.2-201ENST00000524966 ZNF296Q8WUU4 475 aaPredicted RBP13.02□□□□□ -0.33
AP001001.2-201ENST00000524966 ZCCHC17Q9NP64 241 aaKnown RBP13.02□□□□□ -0.33
AP001001.2-201ENST00000524966 BAZ2AQ9UIF9 1905 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms