RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 PICK1Q9NRD5 415 aa11.85□□□□□ -0.51
CNKSR1-209ENST00000524529 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
CNKSR1-209ENST00000524529 GABRQQ9UN88 632 aa11.85□□□□□ -0.51
CNKSR1-209ENST00000524529 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
CNKSR1-209ENST00000524529 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 LDHCP07864 332 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 UQCRFS1P1P0C7P4 283 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 ZAP70P43403 619 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 PRMT2P55345 433 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 GSTO1P78417 241 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 JAG1P78504 1218 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 PRKCZQ05513 592 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 SHROOM1Q2M3G4 852 aaPredicted RBP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 HABP4Q5JVS0 413 aaKnown RBP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 TREML2Q5T2D2 321 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 FASTKD5Q7L8L6 764 aaKnown RBP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 EAF2Q96CJ1 260 aaPredicted RBP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 DNAJC18Q9H819 358 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 PIH1D3Q9NQM4 214 aaKnown RBP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 AATFQ9NY61 560 aaKnown RBP eCLIP11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 TRIOBPQ9H2D6 2365 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 MYPNQ86TC9 1320 aa11.84□□□□□ -0.51
CNKSR1-209ENST00000524529 PLXNB2O15031 1838 aa11.83□□□□□ -0.51
CNKSR1-209ENST00000524529 FMNL1O95466 1100 aaPredicted RBP11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 CAP2P40123 477 aa11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 PPP4CP60510 307 aa11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 SLC4A8Q2Y0W8 1093 aa11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 CEP85Q6P2H3 762 aa11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 TEX11Q8IYF3 940 aa11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 ZNF512BQ96KM6 892 aaPredicted RBP11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 CCDC8Q9H0W5 538 aaPredicted RBP11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 CHMP4BQ9H444 224 aaKnown RBP11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
CNKSR1-209ENST00000524529 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 GRK4P32298 578 aa11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 DYNLL1P63167 89 aaKnown RBP11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 SPP2Q13103 211 aa11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 NAA16Q6N069 864 aaPredicted RBP11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 PIAS4Q8N2W9 510 aaPredicted RBP11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 AGTPBP1Q9UPW5 1226 aa11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 NDUFB9Q9Y6M9 179 aa11.82□□□□□ -0.52
CNKSR1-209ENST00000524529 FCGRTP55899 365 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 RRP1P56182 461 aaKnown RBP11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 OS9Q13438 667 aaPredicted RBP11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 METTL16Q86W50 562 aaKnown RBP11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 RAET1EQ8TD07 263 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 ALPK3Q96L96 1907 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 FLT1P17948 1338 aa11.81□□□□□ -0.52
CNKSR1-209ENST00000524529 DDX60LQ5H9U9 1706 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 HOXD10P28358 340 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 HMGCS2P54868 508 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 SH3D19Q5HYK7 790 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 UBE2Q1Q7Z7E8 422 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 ZNF280CQ8ND82 737 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 PI4KBQ9UBF8 816 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 HERC5Q9UII4 1024 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
CNKSR1-209ENST00000524529 USP17L5A8MUK1 530 aa11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 PEX10O60683 326 aa11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 CCL5P13501 91 aa11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 ELNP15502 786 aa11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 FLT3LGP49771 235 aa11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 FXR1P51114 621 aaKnown RBP eCLIP11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 UNC93B1Q9H1C4 597 aa11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 ASCC2Q9H1I8 757 aaPredicted RBP11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 DDX19BQ9UMR2 479 aa11.79□□□□□ -0.52
CNKSR1-209ENST00000524529 GDF11O95390 407 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 BAG3O95817 575 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 GJB1P08034 283 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 CYP7A1P22680 504 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 GJA8P48165 433 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 FAM110CQ1W6H9 321 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 POTEEQ6S8J3 1075 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 MIGA1Q8NAN2 632 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 WDR18Q9BV38 432 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
CNKSR1-209ENST00000524529 TNPO2O14787 897 aaKnown RBP11.77□□□□□ -0.53
CNKSR1-209ENST00000524529 ADCY3O60266 1144 aa11.77□□□□□ -0.53
CNKSR1-209ENST00000524529 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms