RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SPECC1LQ69YQ0 1117 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 ACRBPQ8NEB7 543 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 ECHDC1Q9NTX5 307 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 CRB1P82279 1406 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 A0A1W2PQ27 194 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 A0A1W2PQ64 194 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 A0A1W2PQD8 194 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 MEFVO15553 781 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 AP1G2O75843 785 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 RPSAP08865 295 aaKnown RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 NBPF7P0C2Y1 421 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 ERCC3P19447 782 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 GRIK3Q13003 919 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 NAA25Q14CX7 972 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 TEX13AQ9BXU3 409 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 KIF9Q9HAQ2 790 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 USP42Q9H9J4 1324 aaKnown RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 PPP1R12BO60237 982 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 NEK1Q96PY6 1258 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 NAPGQ99747 312 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 SLC40A1Q9NP59 571 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 RTEL1Q9NZ71 1219 aa11.55□□□□□ -0.56
SPIDR-224ENST00000524126 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.55□□□□□ -0.56
SPIDR-224ENST00000524126 MPHOSPH10O00566 681 aaKnown RBP11.54□□□□□ -0.56
SPIDR-224ENST00000524126 GCKP35557 465 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 PEX19P40855 299 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 USP14P54578 494 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 FAM228AQ86W67 206 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 TRMT44Q8IYL2 757 aaKnown RBP11.54□□□□□ -0.56
SPIDR-224ENST00000524126 CCDC148Q8NFR7 591 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 IP6K1Q92551 441 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 TATDN2Q93075 761 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 PA2G4Q9UQ80 394 aaKnown RBP11.54□□□□□ -0.56
SPIDR-224ENST00000524126 CHGBP05060 677 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 MARCKSP29966 332 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-224ENST00000524126 CCDC40Q4G0X9 1142 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 ARHGEF25Q86VW2 580 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 SCLT1Q96NL6 688 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 SELENOOQ9BVL4 669 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 HDAC6Q9UBN7 1215 aa11.54□□□□□ -0.56
SPIDR-224ENST00000524126 GOLGA6BA6NDN3 693 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 SPTLC2O15270 562 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 RASSF9O75901 435 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 RBM5P52756 815 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPIDR-224ENST00000524126 PIP4K2BP78356 416 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
SPIDR-224ENST00000524126 CCDC13Q8IYE1 715 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 CLASRPQ8N2M8 674 aaKnown RBP11.53□□□□□ -0.56
SPIDR-224ENST00000524126 EDC3Q96F86 508 aaKnown RBP11.53□□□□□ -0.56
SPIDR-224ENST00000524126 FSD1Q9BTV5 496 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 ATP1A2P50993 1020 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 AACSQ86V21 672 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
SPIDR-224ENST00000524126 THOC1Q96FV9 657 aaKnown RBP11.53□□□□□ -0.56
SPIDR-224ENST00000524126 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 PHAXQ9H814 394 aaKnown RBP11.53□□□□□ -0.56
SPIDR-224ENST00000524126 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 TUBE1Q9UJT0 475 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 MYO6Q9UM54 1294 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 ARHGEF10O15013 1369 aa11.53□□□□□ -0.56
SPIDR-224ENST00000524126 AKR1B15C9JRZ8 316 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-224ENST00000524126 ENC1O14682 589 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 TEX33O43247 280 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 ZEB2O60315 1214 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 SRGAP2O75044 1071 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 BMP6P22004 513 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 SF3B2Q13435 895 aaKnown RBP11.52□□□□□ -0.57
SPIDR-224ENST00000524126 OLFM4Q6UX06 510 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 ARL8AQ96BM9 186 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 CAPZA3Q96KX2 299 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 MMS19Q96T76 1030 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 CCDC8Q9H0W5 538 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-224ENST00000524126 ETAA1Q9NY74 926 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 TLR7Q9NYK1 1049 aaKnown RBP11.52□□□□□ -0.57
SPIDR-224ENST00000524126 SLAIN2Q9P270 581 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 KDRP35968 1356 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 COL15A1P39059 1388 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 FOXN1O15353 648 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 SMTNP53814 917 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 AMPD2Q01433 879 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.571e-11■■■■■ 41.2
SPIDR-224ENST00000524126 RBL2Q08999 1139 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 ATL3Q6DD88 541 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 TLDC1Q6P9B6 456 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 B4GALNT4Q76KP1 1039 aa11.52□□□□□ -0.57
SPIDR-224ENST00000524126 SH2D3CQ8N5H7 860 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms