RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SMIM22K7EJ46 135 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 SLC10A3P09131 477 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 ECE1P42892 770 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 VGLL4Q14135 290 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 DNAJC18Q9H819 358 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.42■□□□□ 0.063e-7■■■■■ 34.2
VEGFA-224ENST00000523873 MCM9Q9NXL9 1143 aa15.42■□□□□ 0.06
VEGFA-224ENST00000523873 POLR3DP05423 398 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-224ENST00000523873 PLCD1P51178 756 aa15.41■□□□□ 0.06
VEGFA-224ENST00000523873 RRP1BQ14684 758 aaKnown RBP15.41■□□□□ 0.06
VEGFA-224ENST00000523873 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
VEGFA-224ENST00000523873 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-224ENST00000523873 ZNF112Q9UJU3 913 aa15.41■□□□□ 0.06
VEGFA-224ENST00000523873 SNCAIPQ9Y6H5 919 aa15.41■□□□□ 0.06
VEGFA-224ENST00000523873 GSG1L2A8MUP6 293 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 PHF20L1A8MW92 1017 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 HLA-DOAP06340 250 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 GJA5P36382 358 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 MAP3K10Q02779 954 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 SLC10A4Q96EP9 437 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 EPB41L4AQ9HCS5 686 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-224ENST00000523873 PI4KBQ9UBF8 816 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 CSADQ9Y600 493 aa15.4■□□□□ 0.06
VEGFA-224ENST00000523873 TBC1D12O60347 775 aa15.39■□□□□ 0.05
VEGFA-224ENST00000523873 SHROOM1Q2M3G4 852 aaPredicted RBP15.39■□□□□ 0.05
VEGFA-224ENST00000523873 ZNF589Q86UQ0 364 aaPredicted RBP15.39■□□□□ 0.05
VEGFA-224ENST00000523873 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
VEGFA-224ENST00000523873 CRACR2BQ8N4Y2 399 aaPredicted RBP15.39■□□□□ 0.05
VEGFA-224ENST00000523873 CCDC102AQ96A19 550 aa15.39■□□□□ 0.05
VEGFA-224ENST00000523873 OPTNQ96CV9 577 aa15.39■□□□□ 0.05
VEGFA-224ENST00000523873 HELLSQ9NRZ9 838 aa15.39■□□□□ 0.05
VEGFA-224ENST00000523873 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
VEGFA-224ENST00000523873 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
VEGFA-224ENST00000523873 LAMA4Q16363 1823 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 USP17L12C9JPN9 530 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 USP17L21D6R901 530 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 FOXP2O15409 715 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 APPP05067 770 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 KIF23Q02241 960 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-224ENST00000523873 MCMDC2Q4G0Z9 681 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 SPRYD7Q5W111 196 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
VEGFA-224ENST00000523873 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 FOXP4Q8IVH2 680 aaPredicted RBP15.38■□□□□ 0.05
VEGFA-224ENST00000523873 SLC44A5Q8NCS7 719 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 DYNLL2Q96FJ2 89 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 OTUD5Q96G74 571 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 TRIM34Q9BYJ4 488 aa15.38■□□□□ 0.05
VEGFA-224ENST00000523873 GDF11O95390 407 aa15.37■□□□□ 0.05
VEGFA-224ENST00000523873 JAG1P78504 1218 aa15.37■□□□□ 0.05
VEGFA-224ENST00000523873 NOGQ13253 232 aa15.37■□□□□ 0.05
VEGFA-224ENST00000523873 NOL9Q5SY16 702 aaKnown RBP15.37■□□□□ 0.05
VEGFA-224ENST00000523873 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
VEGFA-224ENST00000523873 IFNL3Q8IZI9 196 aa15.37■□□□□ 0.05
VEGFA-224ENST00000523873 STK11IPQ8N1F8 1099 aa15.37■□□□□ 0.05
VEGFA-224ENST00000523873 IL25Q9H293 177 aa15.37■□□□□ 0.05
VEGFA-224ENST00000523873 HERC5Q9UII4 1024 aaKnown RBP15.37■□□□□ 0.05
VEGFA-224ENST00000523873 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 UNCXA6NJT0 531 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 PATL2C9JE40 543 aaKnown RBP15.36■□□□□ 0.05
VEGFA-224ENST00000523873 GNAT2P19087 354 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 TDO2P48775 406 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 C12orf60Q5U649 245 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
VEGFA-224ENST00000523873 SCYL3Q8IZE3 742 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 JMYQ8N9B5 988 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 EHD4Q9H223 541 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 SERPINB13Q9UIV8 391 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 CCDC171Q6TFL3 1326 aa15.36■□□□□ 0.05
VEGFA-224ENST00000523873 MINDY4BA8MYZ0 360 aa15.35■□□□□ 0.05
VEGFA-224ENST00000523873 CTNND1O60716 968 aaKnown RBP15.35■□□□□ 0.05
VEGFA-224ENST00000523873 SHMT1P34896 483 aa15.35■□□□□ 0.05
VEGFA-224ENST00000523873 CAP2P40123 477 aa15.35■□□□□ 0.05
VEGFA-224ENST00000523873 GABPAQ06546 454 aa15.35■□□□□ 0.05
VEGFA-224ENST00000523873 GREB1LQ9C091 1923 aaPredicted RBP15.35■□□□□ 0.05
VEGFA-224ENST00000523873 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
VEGFA-224ENST00000523873 HIP1O00291 1037 aa15.34■□□□□ 0.05
VEGFA-224ENST00000523873 CHMLP26374 656 aa15.34■□□□□ 0.05
VEGFA-224ENST00000523873 MAP2K2P36507 400 aa15.34■□□□□ 0.05
VEGFA-224ENST00000523873 ERO1BQ86YB8 467 aa15.34■□□□□ 0.05
VEGFA-224ENST00000523873 NAPBQ9H115 298 aa15.34■□□□□ 0.05
VEGFA-224ENST00000523873 PICK1Q9NRD5 415 aa15.34■□□□□ 0.05
VEGFA-224ENST00000523873 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-224ENST00000523873 IRF6O14896 467 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 ZBTB48P10074 688 aaPredicted RBP15.33■□□□□ 0.04
VEGFA-224ENST00000523873 HSPD1P10809 573 aaKnown RBP15.33■□□□□ 0.04
VEGFA-224ENST00000523873 PTPRAP18433 802 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 SBK1Q52WX2 424 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 GIMAP6Q6P9H5 292 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 AMOTL1Q8IY63 956 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 NACAP1Q9BZK3 213 aa15.33■□□□□ 0.04
VEGFA-224ENST00000523873 LOC285556D6RIA3 1793 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms