RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 SMC2O95347 1197 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 TOB1P50616 345 aaPredicted RBP13.03□□□□□ -0.32
TNPO1-213ENST00000523768 SF3B3Q15393 1217 aaKnown RBP13.03□□□□□ -0.32
TNPO1-213ENST00000523768 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
TNPO1-213ENST00000523768 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 HSD3B7Q9H2F3 369 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 GNL3LQ9NVN8 582 aaKnown RBP13.03□□□□□ -0.32
TNPO1-213ENST00000523768 MYO1BO43795 1136 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 PTPREP23469 700 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 SEC23AQ15436 765 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 CEP135Q66GS9 1140 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 ADGRA1Q86SQ6 560 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 METTL16Q86W50 562 aaKnown RBP13.03□□□□□ -0.32
TNPO1-213ENST00000523768 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 COL4A1P02462 1669 aa13.03□□□□□ -0.32
TNPO1-213ENST00000523768 A0A0G2JS52 829 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 USP27XA6NNY8 438 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 KCNJ6P48051 423 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 FANCCQ00597 558 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 MYL5Q02045 173 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 PNOCQ13519 176 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 ANKRD18AQ8IVF6 992 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 CCAR2Q8N163 923 aaKnown RBP13.02□□□□□ -0.32
TNPO1-213ENST00000523768 ESR2Q92731 530 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.32
TNPO1-213ENST00000523768 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.32
TNPO1-213ENST00000523768 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.32
TNPO1-213ENST00000523768 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.32
TNPO1-213ENST00000523768 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.33
TNPO1-213ENST00000523768 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
TNPO1-213ENST00000523768 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
TNPO1-213ENST00000523768 CNNM3Q8NE01 707 aa13.02□□□□□ -0.33
TNPO1-213ENST00000523768 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.33
TNPO1-213ENST00000523768 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.33
TNPO1-213ENST00000523768 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
TNPO1-213ENST00000523768 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
TNPO1-213ENST00000523768 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.33
TNPO1-213ENST00000523768 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.33
TNPO1-213ENST00000523768 RGL2O15211 777 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 BARGINQ6ZT62 677 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 FOXP4Q8IVH2 680 aaPredicted RBP13.01□□□□□ -0.33
TNPO1-213ENST00000523768 CCDC112Q8NEF3 446 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 ABCF2Q9UG63 623 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 COL5A3P25940 1745 aaPredicted RBP13.01□□□□□ -0.33
TNPO1-213ENST00000523768 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
TNPO1-213ENST00000523768 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
TNPO1-213ENST00000523768 GYG1P46976 350 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
TNPO1-213ENST00000523768 BRIP1Q9BX63 1249 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 RAI14Q9P0K7 980 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 HOOK1Q9UJC3 728 aaKnown RBP13.01□□□□□ -0.33
TNPO1-213ENST00000523768 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 COL1A1P02452 1464 aaPredicted RBP13.01□□□□□ -0.33
TNPO1-213ENST00000523768 ZNF831Q5JPB2 1677 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 A0A1B0GUL6 1792 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
TNPO1-213ENST00000523768 TNKSO95271 1327 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
TNPO1-213ENST00000523768 ADAMTS2O95450 1211 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 FGRP09769 529 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
TNPO1-213ENST00000523768 ERFEQ4G0M1 354 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 OLFM4Q6UX06 510 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 IQSEC3Q9UPP2 1182 aaPredicted RBP13□□□□□ -0.33
TNPO1-213ENST00000523768 MINDY4BA8MYZ0 360 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 CBFA2T2O43439 604 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 SFPQP23246 707 aaKnown RBP eCLIP13□□□□□ -0.33
TNPO1-213ENST00000523768 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 NUP133Q8WUM0 1156 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 CEP131Q9UPN4 1083 aa13□□□□□ -0.33
TNPO1-213ENST00000523768 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
TNPO1-213ENST00000523768 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
TNPO1-213ENST00000523768 ATP1A3P13637 1013 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 NR5A1Q13285 461 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 SLC10A5Q5PT55 438 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 MINPP1Q9UNW1 487 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 NCBP1Q09161 790 aaKnown RBP12.99□□□□□ -0.33
TNPO1-213ENST00000523768 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
TNPO1-213ENST00000523768 CMTR1Q8N1G2 835 aaKnown RBP12.99□□□□□ -0.33
TNPO1-213ENST00000523768 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 FAM84BQ96KN1 310 aaPredicted RBP12.99□□□□□ -0.33
TNPO1-213ENST00000523768 ZSCAN10Q96SZ4 725 aaPredicted RBP12.99□□□□□ -0.33
TNPO1-213ENST00000523768 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 DUOX1Q9NRD9 1551 aa12.99□□□□□ -0.33
TNPO1-213ENST00000523768 SEMA3EO15041 775 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 NRDCO43847 1150 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 XBP1P17861 261 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms