RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 GARTP22102 1010 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 MAP4P27816 1152 aaKnown RBP7.68□□□□□ -1.18
PCM1-219ENST00000523540 SEPT6Q14141 434 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 ZNF394Q53GI3 561 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 NT5DC4Q86YG4 428 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 MFSD14AQ96MC6 490 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 MIR1-1HGQ9H1L0 117 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 KCNQ5Q9NR82 932 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 CCDC39Q9UFE4 941 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 DDX41Q9UJV9 622 aaKnown RBP7.68□□□□□ -1.18
PCM1-219ENST00000523540 PPP1R9AQ9ULJ8 1098 aa7.68□□□□□ -1.18
PCM1-219ENST00000523540 F13BP05160 661 aa7.67□□□□□ -1.18
PCM1-219ENST00000523540 FOSL1P15407 271 aa7.67□□□□□ -1.18
PCM1-219ENST00000523540 RACK1P63244 317 aaKnown RBP7.67□□□□□ -1.18
PCM1-219ENST00000523540 RING1Q06587 406 aa7.67□□□□□ -1.18
PCM1-219ENST00000523540 AKAP4Q5JQC9 854 aa7.67□□□□□ -1.18
PCM1-219ENST00000523540 USP48Q86UV5 1035 aa7.67□□□□□ -1.18
PCM1-219ENST00000523540 ITGB5P18084 799 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 LMNB1P20700 586 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 EIF4A3P38919 411 aaKnown RBP7.66□□□□□ -1.18
PCM1-219ENST00000523540 USP11P51784 963 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 RAD51AP2Q09MP3 1159 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 SGO2Q562F6 1265 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 DIEXFQ68CQ4 756 aaKnown RBP7.66□□□□□ -1.18
PCM1-219ENST00000523540 FBXL19Q6PCT2 694 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 PAOXQ6QHF9 649 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 BNC2Q6ZN30 1099 aaPredicted RBP7.66□□□□□ -1.18
PCM1-219ENST00000523540 ACSBG1Q96GR2 724 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 FANCD2OSQ96PS1 177 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 ADAMTS1Q9UHI8 967 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 PCDHA4Q9UN74 947 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 AP4E1Q9UPM8 1137 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
PCM1-219ENST00000523540 FAM95CA0A1B0GW59 222 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 FAM221AA4D161 298 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 FANCGO15287 622 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 C8AP07357 584 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 FAM160A1Q05DH4 1040 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 SEZ6L2Q6UXD5 910 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
PCM1-219ENST00000523540 RNF214Q8ND24 703 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 JARID2Q92833 1246 aaPredicted RBP7.65□□□□□ -1.18
PCM1-219ENST00000523540 KRTAP4-2Q9BYR5 136 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 FAM105AQ9NUU6 356 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 LEMD3Q9Y2U8 911 aa7.65□□□□□ -1.18
PCM1-219ENST00000523540 GREM1O60565 184 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 F13A1P00488 732 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 ASPAP45381 313 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 CDK8P49336 464 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 INPP5AQ14642 412 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 CDPF1Q6NVV7 123 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 LRFN4Q6PJG9 635 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 VSIG10LQ86VR7 867 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 GOLM1Q8NBJ4 401 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 GIMAP7Q8NHV1 300 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 ZNF296Q8WUU4 475 aaPredicted RBP7.64□□□□□ -1.19
PCM1-219ENST00000523540 GATAD2BQ8WXI9 593 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 METTL22Q9BUU2 404 aaPredicted RBP7.64□□□□□ -1.19
PCM1-219ENST00000523540 SEMA6CQ9H3T2 930 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 DISC1Q9NRI5 854 aa7.64□□□□□ -1.19
PCM1-219ENST00000523540 ANGEL1Q9UNK9 670 aaKnown RBP7.64□□□□□ -1.19
PCM1-219ENST00000523540 GFRA2O00451 464 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 CILPO75339 1184 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 SNAP47Q5SQN1 464 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 DYMQ7RTS9 669 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 ZNF654Q8IZM8 581 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 ASIC4Q96FT7 647 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 FBXL18Q96ME1 805 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 TGIF2Q9GZN2 237 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 ATG3Q9NT62 314 aa7.63□□□□□ -1.19
PCM1-219ENST00000523540 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.63□□□□□ -1.19
PCM1-219ENST00000523540 DCDC2CA8MYV0 355 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 CAP2P40123 477 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 CYP27A1Q02318 531 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 RPL6Q02878 288 aaKnown RBP7.62□□□□□ -1.19
PCM1-219ENST00000523540 LCE4AQ5TA78 99 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 FAM196AQ6ZSG2 479 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 CYFIP1Q7L576 1253 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 SHISA5Q8N114 240 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 FBLIM1Q8WUP2 373 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 PLPPR2Q96GM1 343 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 PIDD1Q9HB75 910 aa7.62□□□□□ -1.19
PCM1-219ENST00000523540 SUPT16HQ9Y5B9 1047 aaKnown RBP7.62□□□□□ -1.19
PCM1-219ENST00000523540 JUNBP17275 347 aaPredicted RBP7.61□□□□□ -1.19
PCM1-219ENST00000523540 ERCC5P28715 1186 aaPredicted RBP7.61□□□□□ -1.19
PCM1-219ENST00000523540 HDXQ7Z353 690 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 ZAR1Q86SH2 424 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 C12orf40Q86WS4 652 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 KIAA0825Q8IV33 1275 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 SMYD4Q8IYR2 804 aaPredicted RBP7.61□□□□□ -1.19
PCM1-219ENST00000523540 FBXO27Q8NI29 283 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 GATA6Q92908 595 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
PCM1-219ENST00000523540 SPON2Q9BUD6 331 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 NT5C1AQ9BXI3 368 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 OSBPL1AQ9BXW6 950 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 PRKAG2Q9UGJ0 569 aa7.61□□□□□ -1.19
PCM1-219ENST00000523540 PCOLCE2Q9UKZ9 415 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms