RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 RXRAP19793 462 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 CCDC144CPQ8IYA2 1237 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 ZNF444Q8N0Y2 327 aaPredicted RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 OSBPL5Q9H0X9 879 aaPredicted RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 DDTLA6NHG4 134 aaPredicted RBP11.02□□□□□ -0.64
SDCBP-212ENST00000523483 K7ELQ4 463 aaPredicted RBP11.02□□□□□ -0.64
SDCBP-212ENST00000523483 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.64
SDCBP-212ENST00000523483 PRKG1Q13976 671 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 C12orf60Q5U649 245 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 TTC6Q86TZ1 520 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 CDAN1Q8IWY9 1227 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 NECAB1Q8N987 351 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 ESR2Q92731 530 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 GPRC5DQ9NZD1 345 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 ZSWIM5Q9P217 1185 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 ADAMTSL1Q8N6G6 1762 aa11.02□□□□□ -0.64
SDCBP-212ENST00000523483 ERICH2A1L162 156 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 APOBRQ0VD83 1088 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 TMEM67Q5HYA8 995 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 ANGEL2Q5VTE6 544 aaKnown RBP11.02□□□□□ -0.65
SDCBP-212ENST00000523483 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-212ENST00000523483 FAM198AQ9UFP1 575 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 STX8Q9UNK0 236 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 NMT2O60551 498 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 HMGB1P09429 215 aaKnown RBP11.02□□□□□ -0.65
SDCBP-212ENST00000523483 TSPY3P0CV98 308 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 TSPY8P0CW00 308 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 CYB5R4Q7L1T6 521 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 TACC3Q9Y6A5 838 aa11.02□□□□□ -0.65
SDCBP-212ENST00000523483 CCT2P78371 535 aaKnown RBP11.01□□□□□ -0.65
SDCBP-212ENST00000523483 DPF2Q92785 391 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 MYL10Q9BUA6 226 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 KRT23Q9C075 422 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 CNNM2Q9H8M5 875 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 GGA3Q9NZ52 723 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 SERPINB13Q9UIV8 391 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 HACL1Q9UJ83 578 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 TFAP4Q01664 338 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 SART3Q15020 963 aaKnown RBP11.01□□□□□ -0.65
SDCBP-212ENST00000523483 NUP133Q8WUM0 1156 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 TMX3Q96JJ7 454 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 RASA3Q14644 834 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 DLK2Q6UY11 383 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 IQCA1Q86XH1 822 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 CCDC83Q8IWF9 413 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 TM6SF1Q9BZW5 370 aa11.01□□□□□ -0.65
SDCBP-212ENST00000523483 MKRN1Q9UHC7 482 aaKnown RBP11.01□□□□□ -0.65
SDCBP-212ENST00000523483 ARFGEF1Q9Y6D6 1849 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 RPAP1Q9BWH6 1393 aaPredicted RBP11□□□□□ -0.65
SDCBP-212ENST00000523483 CDK8P49336 464 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 STAG1Q8WVM7 1258 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 ZBTB22O15209 634 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 SPDYE2Q495Y8 402 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 CLEC10AQ8IUN9 316 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
SDCBP-212ENST00000523483 KCNB2Q92953 911 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 MRIQ9BWK5 157 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 SENP2Q9HC62 589 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 FZD1Q9UP38 647 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 KLF18A0A0U1RQI7 1052 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 IGSF3O75054 1194 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 GDF11O95390 407 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 LARGE1O95461 756 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 ANTXR2P58335 489 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 TSGA10IPQ3SY00 556 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 CCDC82Q8N4S0 544 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 ZNF287Q9HBT7 754 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 TPCN1Q9ULQ1 816 aa11□□□□□ -0.65
SDCBP-212ENST00000523483 CCDC69A6NI79 296 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 GOLGA8BA8MQT2 603 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 TNNI2P48788 182 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 PI4KBQ9UBF8 816 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 TNKSO95271 1327 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 ZMYM6O95789 1325 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 FOSBP53539 338 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 WTAPQ15007 396 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 SBK1Q52WX2 424 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 SH3BP5LQ7L8J4 393 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 TTC14Q96N46 770 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
SDCBP-212ENST00000523483 NCOA5Q9HCD5 579 aaKnown RBP10.99□□□□□ -0.65
SDCBP-212ENST00000523483 TOB2Q14106 344 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 RAB3GAP1Q15042 981 aa10.98□□□□□ -0.65
SDCBP-212ENST00000523483 FOXD4L5Q5VV16 416 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
SDCBP-212ENST00000523483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 ZNF280AP59817 542 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 TNFAIP1Q13829 316 aa10.98□□□□□ -0.65
SDCBP-212ENST00000523483 ANKRD1Q15327 319 aa10.98□□□□□ -0.65
SDCBP-212ENST00000523483 ME3Q16798 604 aa10.98□□□□□ -0.65
SDCBP-212ENST00000523483 SHROOM1Q2M3G4 852 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms