RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	MPHOSPH6	Q99547	160 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	VPS18	Q9P253	973 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	LMTK3	Q96Q04	1460 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ABCC4	O15439	1325 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	XRN1	Q8IZH2	1706 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	PLCH2	O75038	1416 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	KIDINS220	Q9ULH0	1771 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	EME2	A4GXA9	379 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SPDYE3	A6NKU9	549 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288		E7ENQ6	273 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ABCB7	O75027	752 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	PYGB	P11216	843 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	EVC	P57679	992 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	GDAP1L1	Q96MZ0	367 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	API5	Q9BZZ5	524 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SRCIN1	Q9C0H9	1055 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SLC12A5	Q9H2X9	1139 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SLC39A2	Q9NP94	309 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ATP8A1	Q9Y2Q0	1164 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	GRIN2D	O15399	1336 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	GOLGA6L7	A0A1B0GV03	622 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	HAX1	O00165	279 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	STARD3NL	O95772	234 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	SYF2	O95926	243 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	MYL1	P05976	194 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZNF24	P17028	368 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	PRKAR2B	P31323	418 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	PHEX	P78562	749 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	RRS1	Q15050	365 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	RC3H1	Q5TC82	1133 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	C6orf89	Q6UWU4	347 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	KRT28	Q7Z3Y7	464 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	KCNH5	Q8NCM2	988 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	JADE2	Q9NQC1	790 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288		H3BQV1	296 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	FMNL1	O95466	1100 aa	Predicted RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	UBTFL1	P0CB47	393 aa	Predicted RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC166	P0CW27	439 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	GSPT1	P15170	499 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	GJA8	P48165	433 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	APBA1	Q02410	837 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	PPP2R3A	Q06190	1150 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	XRCC4	Q13426	336 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	BLMH	Q13867	455 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	CHRNA2	Q15822	529 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	STX1A	Q16623	288 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	IFFO2	Q5TF58	517 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ATL3	Q6DD88	541 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	SLC30A9	Q6PML9	568 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ARMC9	Q7Z3E5	817 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	LUZP1	Q86V48	1076 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	LCA5	Q86VQ0	697 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ALDH16A1	Q8IZ83	802 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	MYOCD	Q8IZQ8	938 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	NUDT16	Q96DE0	195 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	NUP62CL	Q9H1M0	184 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ANKZF1	Q9H8Y5	726 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	KIF9	Q9HAQ2	790 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	DDX20	Q9UHI6	824 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	TMCO1	Q9UM00	188 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZNF510	Q9Y2H8	683 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	UBN2	Q6ZU65	1347 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZBED4	O75132	1171 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	AP1G2	O75843	785 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	RNF8	O76064	485 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	SEC31A	O94979	1220 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	GSTA1	P08263	222 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	CPA3	P15088	417 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	POLD1	P28340	1107 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	RXRB	P28702	533 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	GCK	P35557	465 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	PAPOLA	P51003	745 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	CHMP4BP1	P59074	171 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	PSMD2	Q13200	908 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	TRIM29	Q14134	588 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	SRGAP1	Q7Z6B7	1085 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	RALYL	Q86SE5	291 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	PLEKHM2	Q8IWE5	1019 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZNF526	Q8TF50	670 aa	Predicted RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	SLC35B4	Q969S0	331 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	TRPC6	Q9Y210	931 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	TMEM98	Q9Y2Y6	226 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC61	Q9Y6R9	512 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	TRO	Q12816	1431 aa	Predicted RBP	4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	ANKAR	Q7Z5J8	1434 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	PPL	O60437	1756 aa		4.35	□□□□□ -1.71
FAM49B-225	ENST00000523288	TMEM131L	A2VDJ0	1609 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	LRRC37A3	O60309	1634 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	BIRC5	O15392	142 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	KIF5C	O60282	957 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	ALDH3A1	P30838	453 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	LRMP	Q12912	555 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	NNT	Q13423	1086 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	WHAMMP3	Q1A5X7	153 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	RSPH3	Q86UC2	560 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	LRRC49	Q8IUZ0	686 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	DHX40	Q8IX18	779 aa	Known RBP	4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	PAF1	Q8N7H5	531 aa		4.34	□□□□□ -1.71
FAM49B-225	ENST00000523288	RSPH1	Q8WYR4	309 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms