RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 ANKRD2Q9GZV1 360 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 RNF41Q9H4P4 317 aaPredicted RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 GJB4Q9NTQ9 266 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 FAM217BQ9NTX9 383 aaPredicted RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 POLR3EQ9NVU0 708 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 ABCF2Q9UG63 623 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 ANAPC4Q9UJX5 808 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 MYO5AQ9Y4I1 1855 aaKnown RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 PDS5AQ29RF7 1337 aaKnown RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 STK36Q9NRP7 1315 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 A0A1W2PQ27 194 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 A0A1W2PQ64 194 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 A0A1W2PQD8 194 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 CCDC69A6NI79 296 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 PPARAQ07869 468 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 PDAP1Q13442 181 aaKnown RBP7.74□□□□□ -1.17
SHPRH-210ENST00000523276 SNW1Q13573 536 aaKnown RBP7.74□□□□□ -1.17
SHPRH-210ENST00000523276 SART3Q15020 963 aaKnown RBP7.74□□□□□ -1.17
SHPRH-210ENST00000523276 ANO6Q4KMQ2 910 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 SASS6Q6UVJ0 657 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 TPTE2Q6XPS3 522 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 FSIP1Q8NA03 581 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 KCNG4Q8TDN1 519 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 PHKBQ93100 1093 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 PCDHA7Q9UN72 937 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 SLC12A7Q9Y666 1083 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 CLIC4Q9Y696 253 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 A0A1B0GUL6 1792 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 BTAF1O14981 1849 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 AP5Z1O43299 807 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 RANBP6O60518 1105 aaKnown RBP7.74□□□□□ -1.17
SHPRH-210ENST00000523276 IGSF3O75054 1194 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 CAVIN2O95810 425 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 POLR3DP05423 398 aaPredicted RBP7.74□□□□□ -1.17
SHPRH-210ENST00000523276 KLRK1P26718 216 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 RCAN1P53805 252 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 STK38Q15208 465 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 RRP12Q5JTH9 1297 aaKnown RBP7.74□□□□□ -1.17
SHPRH-210ENST00000523276 FAM182BQ5T319 152 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 IER5LQ5T953 404 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 KRT40Q6A162 431 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 ADALQ6DHV7 355 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 SYNE3Q6ZMZ3 975 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 CCDC144CPQ8IYA2 1237 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 MRPS27Q92552 414 aaKnown RBP7.74□□□□□ -1.17
SHPRH-210ENST00000523276 AIFM3Q96NN9 605 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 MYL10Q9BUA6 226 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 CBX8Q9HC52 389 aa7.74□□□□□ -1.17
SHPRH-210ENST00000523276 SPTLC2O15270 562 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 KINO60870 393 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 FMNL1O95466 1100 aaPredicted RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 IFNAR1P17181 557 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 TM4SF1P30408 202 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 HIBADHP31937 336 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 IARSP41252 1262 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 WTAPQ15007 396 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 ANO1Q5XXA6 986 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 LUZP1Q86V48 1076 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 TMTC2Q8N394 836 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 TDRD7Q8NHU6 1098 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 ZNF384Q8TF68 577 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 SDR42E1Q8WUS8 393 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 GJD4Q96KN9 370 aaPredicted RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 BRIP1Q9BX63 1249 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 TOMM22Q9NS69 142 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 MYH15Q9Y2K3 1946 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 ERICH2A1L162 156 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 OFD1O75665 1012 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 DYNLL1P63167 89 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 IRX5P78411 483 aaPredicted RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 SSRP1Q08945 709 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 SF3A1Q15459 793 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 RTN1Q16799 776 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 FMR1NBQ8N0W7 255 aaPredicted RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 CCDC24Q8N4L8 307 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 NSUN4Q96CB9 384 aaKnown RBP7.73□□□□□ -1.17
SHPRH-210ENST00000523276 ZKSCAN3Q9BRR0 538 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 SLC26A6Q9BXS9 759 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 DNAJC25Q9H1X3 360 aa7.73□□□□□ -1.17
SHPRH-210ENST00000523276 IRS2Q9Y4H2 1338 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 CACNA1SQ13698 1873 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 MINDY4BA8MYZ0 360 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 ONECUT3O60422 494 aaPredicted RBP7.72□□□□□ -1.17
SHPRH-210ENST00000523276 U2AF2P26368 475 aaKnown RBP eCLIP7.72□□□□□ -1.172e-8■■■■□ 22.6
SHPRH-210ENST00000523276 RFC4P35249 363 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 ZNF165P49910 485 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 MECOMQ03112 1051 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 TRIM29Q14134 588 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 SEC23AQ15436 765 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 STX1AQ16623 288 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 AXDND1Q5T1B0 1012 aaPredicted RBP7.72□□□□□ -1.17
SHPRH-210ENST00000523276 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 TMED8Q6PL24 325 aaPredicted RBP7.72□□□□□ -1.17
SHPRH-210ENST00000523276 WASF1Q92558 559 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 ESR2Q92731 530 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 NAP1L5Q96NT1 182 aaPredicted RBP7.72□□□□□ -1.17
SHPRH-210ENST00000523276 UBAC1Q9BSL1 405 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 TFCP2L1Q9NZI6 479 aa7.72□□□□□ -1.17
SHPRH-210ENST00000523276 CCDC196A0A1B0GTZ2 297 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms