RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 RNF208Q9H0X6 261 aa18.99■□□□□ 0.63
MRPS28-209ENST00000522987 OSBPL5Q9H0X9 879 aaPredicted RBP18.99■□□□□ 0.63
MRPS28-209ENST00000522987 SPP2Q13103 211 aa18.98■□□□□ 0.63
MRPS28-209ENST00000522987 ZKSCAN2Q63HK3 967 aa18.98■□□□□ 0.63
MRPS28-209ENST00000522987 ANKRD13CQ8N6S4 541 aa18.98■□□□□ 0.63
MRPS28-209ENST00000522987 AATFQ9NY61 560 aaKnown RBP eCLIP18.98■□□□□ 0.63
MRPS28-209ENST00000522987 COLQQ9Y215 455 aaPredicted RBP18.98■□□□□ 0.63
MRPS28-209ENST00000522987 H0YGN5 161 aa18.97■□□□□ 0.63
MRPS28-209ENST00000522987 ZBTB22O15209 634 aa18.97■□□□□ 0.63
MRPS28-209ENST00000522987 NOL10Q9BSC4 688 aaKnown RBP18.97■□□□□ 0.63
MRPS28-209ENST00000522987 UNC93B1Q9H1C4 597 aa18.97■□□□□ 0.63
MRPS28-209ENST00000522987 TNPO2O14787 897 aaKnown RBP18.96■□□□□ 0.63
MRPS28-209ENST00000522987 ADCY3O60266 1144 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 SURF6O75683 361 aaKnown RBP18.96■□□□□ 0.63
MRPS28-209ENST00000522987 UQCRFS1P1P0C7P4 283 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 FLT3LGP49771 235 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 HMGCS2P54868 508 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
MRPS28-209ENST00000522987 SHROOM1Q2M3G4 852 aaPredicted RBP18.96■□□□□ 0.63
MRPS28-209ENST00000522987 TNNI3KQ59H18 835 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
MRPS28-209ENST00000522987 MAPKAPK5Q8IW41 473 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 DPF3Q92784 378 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 PCDH10Q9P2E7 1040 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 AGTPBP1Q9UPW5 1226 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 FPGT-TNNI3KV9GXZ4 949 aa18.96■□□□□ 0.63
MRPS28-209ENST00000522987 UBXN2AP68543 259 aa18.95■□□□□ 0.62
MRPS28-209ENST00000522987 ADGRA1Q86SQ6 560 aa18.95■□□□□ 0.62
MRPS28-209ENST00000522987 TLR7Q9NYK1 1049 aaKnown RBP18.95■□□□□ 0.62
MRPS28-209ENST00000522987 TRIOBPQ9H2D6 2365 aa18.95■□□□□ 0.62
MRPS28-209ENST00000522987 ALPK3Q96L96 1907 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 TBC1D12O60347 775 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 RLBP1P12271 317 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 ZAP70P43403 619 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 POLA2Q14181 598 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 TGFBRAP1Q8WUH2 860 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 CCDC8Q9H0W5 538 aaPredicted RBP18.94■□□□□ 0.62
MRPS28-209ENST00000522987 SAP30BPQ9UHR5 308 aaKnown RBP18.94■□□□□ 0.62
MRPS28-209ENST00000522987 NDUFB9Q9Y6M9 179 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 PLXNB2O15031 1838 aa18.94■□□□□ 0.62
MRPS28-209ENST00000522987 COL2A1P02458 1487 aaPredicted RBP18.93■□□□□ 0.62
MRPS28-209ENST00000522987 PEX10O60683 326 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 INHAP05111 366 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 CYP2E1P05181 493 aaPredicted RBP18.93■□□□□ 0.62
MRPS28-209ENST00000522987 GJB1P08034 283 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 CAP2P40123 477 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 DYNLL1P63167 89 aaKnown RBP18.93■□□□□ 0.62
MRPS28-209ENST00000522987 JAG1P78504 1218 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 ATP8B2P98198 1209 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 CCDC158Q5M9N0 1113 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 FTSJ3Q8IY81 847 aaKnown RBP18.93■□□□□ 0.62
MRPS28-209ENST00000522987 ZNF280CQ8ND82 737 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 SLAIN1Q8ND83 568 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 PIH1D3Q9NQM4 214 aaKnown RBP18.93■□□□□ 0.62
MRPS28-209ENST00000522987 SLC45A1Q9Y2W3 748 aa18.93■□□□□ 0.62
MRPS28-209ENST00000522987 NPM3O75607 178 aaKnown RBP18.92■□□□□ 0.62
MRPS28-209ENST00000522987 GDF11O95390 407 aa18.92■□□□□ 0.62
MRPS28-209ENST00000522987 GJA8P48165 433 aa18.92■□□□□ 0.62
MRPS28-209ENST00000522987 SSH3Q8TE77 659 aa18.92■□□□□ 0.62
MRPS28-209ENST00000522987 U2AF1L4Q8WU68 220 aaKnown RBP18.92■□□□□ 0.62
MRPS28-209ENST00000522987 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
MRPS28-209ENST00000522987 PALD1Q9ULE6 856 aa18.92■□□□□ 0.62
MRPS28-209ENST00000522987 USP17L5A8MUK1 530 aa18.91■□□□□ 0.62
MRPS28-209ENST00000522987 FXR1P51114 621 aaKnown RBP eCLIP18.91■□□□□ 0.62
MRPS28-209ENST00000522987 MTMR2Q13614 643 aa18.91■□□□□ 0.62
MRPS28-209ENST00000522987 CHRDL2Q6WN34 429 aa18.91■□□□□ 0.62
MRPS28-209ENST00000522987 MIER1Q8N108 512 aa18.91■□□□□ 0.62
MRPS28-209ENST00000522987 DBNLQ9UJU6 430 aaKnown RBP18.91■□□□□ 0.62
MRPS28-209ENST00000522987 PNMA3Q9UL41 463 aa18.91■□□□□ 0.62
MRPS28-209ENST00000522987 FARP2O94887 1054 aaPredicted RBP18.9■□□□□ 0.62
MRPS28-209ENST00000522987 BAG3O95817 575 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 CRACR2BQ8N4Y2 399 aaPredicted RBP18.9■□□□□ 0.62
MRPS28-209ENST00000522987 MIGA1Q8NAN2 632 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 PROCA1Q8NCQ7 364 aaPredicted RBP18.9■□□□□ 0.62
MRPS28-209ENST00000522987 NKX2-3Q8TAU0 364 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 COA7Q96BR5 231 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 DEFB118Q96PH6 123 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 ASCC2Q9H1I8 757 aaPredicted RBP18.9■□□□□ 0.62
MRPS28-209ENST00000522987 DNAJC18Q9H819 358 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 GPR108Q9NPR9 543 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 FLT1P17948 1338 aa18.9■□□□□ 0.62
MRPS28-209ENST00000522987 MAP4K4O95819 1239 aaPredicted RBP18.89■□□□□ 0.61
MRPS28-209ENST00000522987 CYP7A1P22680 504 aa18.89■□□□□ 0.61
MRPS28-209ENST00000522987 PI4KBQ9UBF8 816 aa18.89■□□□□ 0.61
MRPS28-209ENST00000522987 HERC5Q9UII4 1024 aaKnown RBP18.89■□□□□ 0.61
MRPS28-209ENST00000522987 IDH1O75874 414 aaKnown RBP18.88■□□□□ 0.61
MRPS28-209ENST00000522987 TFRCP02786 760 aaKnown RBP18.88■□□□□ 0.61
MRPS28-209ENST00000522987 FAM110CQ1W6H9 321 aa18.88■□□□□ 0.61
MRPS28-209ENST00000522987 EAF2Q96CJ1 260 aaPredicted RBP18.88■□□□□ 0.61
MRPS28-209ENST00000522987 AS3MTQ9HBK9 375 aa18.88■□□□□ 0.61
MRPS28-209ENST00000522987 EXOC6BQ9Y2D4 811 aa18.88■□□□□ 0.61
MRPS28-209ENST00000522987 NAV1Q8NEY1 1877 aa18.88■□□□□ 0.61
MRPS28-209ENST00000522987 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
MRPS28-209ENST00000522987 SGPL1O95470 568 aa18.87■□□□□ 0.61
MRPS28-209ENST00000522987 PLCG2P16885 1265 aa18.87■□□□□ 0.61
MRPS28-209ENST00000522987 TRIM32Q13049 653 aa18.87■□□□□ 0.61
MRPS28-209ENST00000522987 UBE2Q1Q7Z7E8 422 aa18.87■□□□□ 0.61
MRPS28-209ENST00000522987 PANK1Q8TE04 598 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms